干旱区生态环境知识资源中心(Arid): Genome Survey of Stipa breviflora Griseb. Using Next-Generation Sequencing

Arid

DOI	10.3390/agriculture13122243
	Genome Survey of Stipa breviflora Griseb. Using Next-Generation Sequencing
	Yun, Xiangjun; Wu, Jinrui; Xu, Bo; Lv, Shijie; Zhang, Le; Zhang, Wenguang; Sun, Shixian; Liu, Guixiang; Zu, Yazhou; Liu, Bin
通讯作者	Liu, GX
来源期刊	AGRICULTURE-BASEL
EISSN	2077-0472
出版年	2023
卷号	13 期号:12
英文摘要	Due to climate change and global warming, the frequency of sandstorms in northern China is increasing. Stipa breviflora, a dominant species in Eurasian grasslands, can help prevent desertification from becoming more serious. Studies on S. breviflora cover a wide range of fields. To the best of our knowledge, the present study is the first to sequence, assemble, and annotate the S. breviflora genome. In total, 2,781,544 contigs were assembled, and 2,600,873 scaffolds were obtained, resulting in a total length of 649,849,683 bp. The number of scaffolds greater than 1 kb was 70,770. We annotated the assembled genome (>121 kb), conducted a selective sweep analysis, and ultimately succeeded in assembling the Matk gene of S. breviflora. More importantly, our research identified 26 scaffolds that may be responsible for the drought tolerance of S. breviflora Griseb. In summary, the data obtained regarding S. breviflora will be of great significance for future research.
英文关键词	gene annotation genome survey next-generation sequencing selective sweep analysis Stipa breviflora Griseb
类型	Article
语种	英语
开放获取类型	gold
收录类别	SCI-E
WOS记录号	WOS:001132046600001
WOS关键词	DROUGHT TOLERANCE ; STRESS TOLERANCE ; GENES ; TOOL ; RESISTANCE ; PLANTS ; RICE
WOS类目	Agronomy
WOS研究方向	Agriculture
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/395162
推荐引用方式 GB/T 7714	Yun, Xiangjun,Wu, Jinrui,Xu, Bo,et al. Genome Survey of Stipa breviflora Griseb. Using Next-Generation Sequencing[J],2023,13(12).
APA	Yun, Xiangjun.,Wu, Jinrui.,Xu, Bo.,Lv, Shijie.,Zhang, Le.,...&Liu, Bin.(2023).Genome Survey of Stipa breviflora Griseb. Using Next-Generation Sequencing.AGRICULTURE-BASEL,13(12).
MLA	Yun, Xiangjun,et al."Genome Survey of Stipa breviflora Griseb. Using Next-Generation Sequencing".AGRICULTURE-BASEL 13.12(2023).