干旱区生态环境知识资源中心(Arid): Profile of the in silico secretome of the palm dieback pathogen, Fusarium oxysporum f. sp. albedinis, a fungus that puts natural oases at risk

Arid

DOI	10.1371/journal.pone.0260830
	Profile of the in silico secretome of the palm dieback pathogen, Fusarium oxysporum f. sp. albedinis, a fungus that puts natural oases at risk
	Rafiqi, Maryam; Jelonek, Lukas; Diouf, Aliou Moussa; Mbaye, AbdouLahat; Rep, Martijn; Diarra, Alhousseine
通讯作者	Rafiqi, M
来源期刊	PLOS ONE
ISSN	1932-6203
出版年	2022
卷号	17 期号:5
英文摘要	Understanding biotic changes that occur alongside climate change constitute a research priority of global significance. Here, we address a plant pathogen that poses a serious threat to life on natural oases, where climate change is already taking a toll and severely impacting human subsistence. Fusarium oxysporum f. sp. albedinis is a pathogen that causes dieback disease on date palms, a tree that provides several critical ecosystem services in natural oases; and consequently, of major importance in this vulnerable habitat. Here, we assess the current state of global pathogen spread, we annotate the genome of a sequenced pathogen strain isolated from the native range and we analyse its in silico secretome. The palm dieback pathogen secretes a large arsenal of effector candidates including a variety of toxins, a distinguished profile of secreted in xylem proteins (SIX) as well as an expanded protein family with an N-terminal conserved motif [SG]PC[KR]P that could be involved in interactions with host membranes. Using agrobiodiversity as a strategy to decrease pathogen infectivity, while providing short term resilient solutions, seems to be widely overcome by the pathogen. Hence, the urgent need for future mechanistic research on the palm dieback disease and a better understanding of pathogen genetic diversity.
类型	Article
语种	英语
开放获取类型	gold, Green Published
收录类别	SCI-E
WOS记录号	WOS:000951362800021
WOS关键词	PARASITICA VAR. NICOTIANAE ; GENOME-WIDE ANALYSIS ; EFFECTOR PROTEINS ; DATE PALM ; LOCALIZATION ; RESISTANCE ; GENES ; CHROMOSOMES ; ELICITOR ; DOMAIN
WOS类目	Multidisciplinary Sciences
WOS研究方向	Science & Technology - Other Topics
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/394029
推荐引用方式 GB/T 7714	Rafiqi, Maryam,Jelonek, Lukas,Diouf, Aliou Moussa,et al. Profile of the in silico secretome of the palm dieback pathogen, Fusarium oxysporum f. sp. albedinis, a fungus that puts natural oases at risk[J],2022,17(5).
APA	Rafiqi, Maryam,Jelonek, Lukas,Diouf, Aliou Moussa,Mbaye, AbdouLahat,Rep, Martijn,&Diarra, Alhousseine.(2022).Profile of the in silico secretome of the palm dieback pathogen, Fusarium oxysporum f. sp. albedinis, a fungus that puts natural oases at risk.PLOS ONE,17(5).
MLA	Rafiqi, Maryam,et al."Profile of the in silico secretome of the palm dieback pathogen, Fusarium oxysporum f. sp. albedinis, a fungus that puts natural oases at risk".PLOS ONE 17.5(2022).