干旱区生态环境知识资源中心(Arid): Phenylobacterium soli sp. nov., isolated from arsenic and cadmium contaminated farmland soil

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DOI	10.1099/ijsem.0.003325
	Phenylobacterium soli sp. nov., isolated from arsenic and cadmium contaminated farmland soil
	Li, Xuexue; Yu, Ying; Choi, Lina; Song, Yali; Wu, Minghan; Wang, Gejiao; Li, Mingshun
通讯作者	Li, MS (corresponding author), Huazhong Agr Univ, Coll Life Sci & Technol, State Key Lab Agr Microbiol, Wuhan 430070, Hubei, Peoples R China.
来源期刊	INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
ISSN	1466-5026
EISSN	1466-5034
出版年	2019
卷号	69 期号:5 页码:1398-1403
英文摘要	A Gram-stain-negative, facultative anaerobic, non-motile and rod-shaped bacterial strain, designated LX32(T), was isolated from arsenic and cadmium contaminated farmland soil. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain LX32(T) was closely related to Phenylobacterium hankyongense HKS-05(T) (97.7 % sequence similarity), Phenylobacterium kunshanense CCTCC AB 2013085(T) (97.4%) and Phenylobacterium deserti CCTCC AB 2016297(T) (97.1 %). The average nucleotide identity values of the whole genome sequences of LX32(T)/P. hankyongense HKS-05(T), LX32(T)/P. kunshanense CCTCC AB 2013085(T) and LX32(T)/P. deserti CCTCC AB 2016297(T) were 79.8, 77.9 and 77.5 %, respectively. Its genome size was 4.02 Mb, comprising 3998 predicted genes with a DNA G+C content of 70.1 mol%. The major fatty acids were C-15:0, C-16:0 and summed feature 8 (comprising C-18: 1 omega 7c and/or C-18: (1)omega 6c). The polar lipid profiles consisted of phosphatidylglycerol, aminophospholipid, seven glycolipids and two unidentified polar lipids. The predominantly respiratory quinone was ubiquinone-10. Based on polyphasic analyses, the isolate is considered to represent a novel species of the genus Phenylobacterium, for which the name Phenylobacterium soli sp. nov. is proposed. The type strain is LX32(T) (=KCTC 62522=CCTCC AB 2018055).
英文关键词	polyphasic taxonomy Phenylobacterium contaminated farmland soil
类型	Article
语种	英语
开放获取类型	Bronze
收录类别	SCI-E
WOS记录号	WOS:000467246300022
WOS关键词	PROPOSED MINIMAL STANDARDS ; EMENDED DESCRIPTION ; BACTERIA ; GROUNDWATER ; TAXONOMY ; FAMILY
WOS类目	Microbiology
WOS研究方向	Microbiology
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/369664
作者单位	[Li, Xuexue; Yu, Ying; Choi, Lina; Song, Yali; Wu, Minghan; Wang, Gejiao; Li, Mingshun] Huazhong Agr Univ, Coll Life Sci & Technol, State Key Lab Agr Microbiol, Wuhan 430070, Hubei, Peoples R China
推荐引用方式 GB/T 7714	Li, Xuexue,Yu, Ying,Choi, Lina,et al. Phenylobacterium soli sp. nov., isolated from arsenic and cadmium contaminated farmland soil[J],2019,69(5):1398-1403.
APA	Li, Xuexue.,Yu, Ying.,Choi, Lina.,Song, Yali.,Wu, Minghan.,...&Li, Mingshun.(2019).Phenylobacterium soli sp. nov., isolated from arsenic and cadmium contaminated farmland soil.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,69(5),1398-1403.
MLA	Li, Xuexue,et al."Phenylobacterium soli sp. nov., isolated from arsenic and cadmium contaminated farmland soil".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 69.5(2019):1398-1403.