干旱区生态环境知识资源中心(Arid): Dataset of full-length transcriptome assembly and annotation of apocynum venetum using pacbio sequel II

Arid

DOI	10.1016/j.dib.2020.106494
	Dataset of full-length transcriptome assembly and annotation of apocynum venetum using pacbio sequel II
	Zhang, Tingting; Li, Mao; Zhan, Ya Guang; Fan, Gui Zhi
通讯作者	Fan, GZ (corresponding author), Northeast Forestry Univ, Key Lab Saline Alkali Vegetat Ecol Restorat, Minist Educ, Harbin 150040, Peoples R China.
来源期刊	DATA IN BRIEF
ISSN	2352-3409
出版年	2020
卷号	33
英文摘要	Apocynum venetum, which belongs to Apocynaceae, is widely distributed throughout salt-barren zones, desert steppes, and alluvial flats of the Mediterranean area and Northwestern China. Apocynum venetum has long been used in traditional Chinese medicine because of its anti-inflammation, antioxidative, anti-hypertensive, anti-cancer, and bactericidal effects. However, the absence of genetic information on Apocynum venetum is an obstacle to understanding its stress resistance or medicinal function. This work was aimed at generating a full-length transcriptome of Apocynum venetum using Pacific Bioscience (PacBio) Single Molecule Real-Time (SMRT) sequencing technology. A total of 18,524 unigenes were obtained, and 18,136 unigenes were successfully annotated. The raw data were uploaded to SRA database, and the BioProject ID is PRJNA650225. The above data will provide the basis for further exploration and understanding of the molecular mechanism in stress resistance or medicinal function of Apocynum venetum. (C) 2020 The Authors. Published by Elsevier Inc.
英文关键词	Apocynum venetum Transcriptomics Pacbio sequel ii Functional annotation
类型	Article ; Data Paper
语种	英语
开放获取类型	DOAJ Gold, Green Published
收录类别	ESCI
WOS记录号	WOS:000600652300160
WOS关键词	TOOL
WOS类目	Multidisciplinary Sciences
WOS研究方向	Science & Technology - Other Topics
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/352543
作者单位	[Zhang, Tingting; Li, Mao; Zhan, Ya Guang; Fan, Gui Zhi] Northeast Forestry Univ, Key Lab Saline Alkali Vegetat Ecol Restorat, Minist Educ, Harbin 150040, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Tingting,Li, Mao,Zhan, Ya Guang,et al. Dataset of full-length transcriptome assembly and annotation of apocynum venetum using pacbio sequel II[J],2020,33.
APA	Zhang, Tingting,Li, Mao,Zhan, Ya Guang,&Fan, Gui Zhi.(2020).Dataset of full-length transcriptome assembly and annotation of apocynum venetum using pacbio sequel II.DATA IN BRIEF,33.
MLA	Zhang, Tingting,et al."Dataset of full-length transcriptome assembly and annotation of apocynum venetum using pacbio sequel II".DATA IN BRIEF 33(2020).