干旱区生态环境知识资源中心(Arid): Characterizing rumen microbiota and CAZyme profile of Indian dromedary camel (Camelus dromedarius) in response to different roughages

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DOI	10.1038/s41598-021-88943-9
	Characterizing rumen microbiota and CAZyme profile of Indian dromedary camel (Camelus dromedarius) in response to different roughages
	Hinsu, Ankit T.; Tulsani, Nilam J.; Panchal, Ketankumar J.; Pandit, Ramesh J.; Jyotsana, Basanti; Dafale, Nishant A.; Patil, Niteen, V; Purohit, Hemant J.; Joshi, Chaitanya G.; Jakhesara, Subhash J.
通讯作者	Jakhesara, SJ (corresponding author), Anand Agr Univ, Coll Vet Sci & AH, Dept Anim Biotechnol, Anand 388001, Gujarat, India.
来源期刊	SCIENTIFIC REPORTS
ISSN	2045-2322
出版年	2021
卷号	11 期号:1
英文摘要	In dromedary camels, which are pseudo-ruminants, rumen or C1 section of stomach is the main compartment involved in fiber degradation, as in true ruminants. However, as camels are adapted to the harsh and scarce grazing conditions of desert, their ruminal microbiota makes an interesting target of study. The present study was undertaken to generate the rumen microbial profile of Indian camel using 16S rRNA amplicon and shotgun metagenomics. The camels were fed three diets differing in the source of roughage. The comparative metagenomic analysis revealed greater proportions of significant differences between two fractions of rumen content followed by diet associated differences. Significant differences were also observed in the rumen microbiota collected at different time-points of the feeding trial. However, fraction related differences were more highlighted as compared to diet dependent changes in microbial profile from shotgun metagenomics data. Further, 16 genera were identified as part of the core rumen microbiome of Indian camels. Moreover, glycoside hydrolases were observed to be the most abundant among all Carbohydrate-Active enzymes and were dominated by GH2, GH3, GH13 and GH43. In all, this study describes the camel rumen microbiota under different dietary conditions with focus on taxonomic, functional, and Carbohydrate-Active enzymes profiles.
类型	Article
语种	英语
开放获取类型	Green Published, gold
收录类别	SCI-E
WOS记录号	WOS:000656499000021
WOS关键词	MOOSE ALCES-ALCES ; GENE ; DIVERSITY ; COMMUNITY ; GENOMES ; BACTERIA ; METAGENOMICS ; FORESTOMACH ; ADAPTATION ; INSIGHTS
WOS类目	Multidisciplinary Sciences
WOS研究方向	Science & Technology - Other Topics
来源机构	ICAR Central Arid Zone Research Institute
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/351735
作者单位	[Hinsu, Ankit T.; Tulsani, Nilam J.; Panchal, Ketankumar J.; Pandit, Ramesh J.; Joshi, Chaitanya G.; Jakhesara, Subhash J.] Anand Agr Univ, Coll Vet Sci & AH, Dept Anim Biotechnol, Anand 388001, Gujarat, India; [Jyotsana, Basanti; Patil, Niteen, V] ICAR Natl Res Ctr Camel, Bikaner 334001, India; [Dafale, Nishant A.; Patil, Niteen, V] ICAR Cent Arid Zone Res Inst, Jodhpur 342003, Rajasthan, India; [Purohit, Hemant J.] CSIR Natl Environm Engn Res Inst, Environm Biotechnol & Genom Div, Nagpur 440020, Maharashtra, India; [Joshi, Chaitanya G.] Gujarat Biotechnol Res Ctr, Gandhinagar 382010, India
推荐引用方式 GB/T 7714	Hinsu, Ankit T.,Tulsani, Nilam J.,Panchal, Ketankumar J.,et al. Characterizing rumen microbiota and CAZyme profile of Indian dromedary camel (Camelus dromedarius) in response to different roughages[J]. ICAR Central Arid Zone Research Institute,2021,11(1).
APA	Hinsu, Ankit T..,Tulsani, Nilam J..,Panchal, Ketankumar J..,Pandit, Ramesh J..,Jyotsana, Basanti.,...&Jakhesara, Subhash J..(2021).Characterizing rumen microbiota and CAZyme profile of Indian dromedary camel (Camelus dromedarius) in response to different roughages.SCIENTIFIC REPORTS,11(1).
MLA	Hinsu, Ankit T.,et al."Characterizing rumen microbiota and CAZyme profile of Indian dromedary camel (Camelus dromedarius) in response to different roughages".SCIENTIFIC REPORTS 11.1(2021).