干旱区生态环境知识资源中心(Arid): Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice

Arid

DOI	10.1093/jhered/esab009
	Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice
	Colella, Jocelyn P.; Tigano, Anna; Dudchenko, Olga; Omer, Arina D.; Khan, Ruqayya; Bochkov, Ivan D.; Aiden, Erez L.; MacManes, Matthew D.
通讯作者	Colella, JP (corresponding author), Univ New Hampshire, Dept Mol Cellular & Biomed Sci, 35 Colovos Rd,Fl 4, Durham, NH 03824 USA.
来源期刊	JOURNAL OF HEREDITY
ISSN	0022-1503
EISSN	1465-7333
出版年	2021
卷号	112 期号:3 页码:286-302
英文摘要	Warming climate and increasing desertification urge the identification of genes involved in heat and dehydration tolerance to better inform and target biodiversity conservation efforts. Comparisons among extant desert-adapted species can highlight parallel or convergent patterns of genome evolution through the identification of shared signatures of selection. We generate a chromosome-level genome assembly for the canyon mouse (Peromyscus crinitus) and test for a signature of parallel evolution by comparing signatures of selective sweeps across population-level genomic resequencing data from another congeneric desert specialist (Peromyscus eremicus) and a widely distributed habitat generalist (Peromyscus maniculatus), that may be locally adapted to arid conditions. We identify few shared candidate loci involved in desert adaptation and do not find support for a shared pattern of parallel evolution. Instead, we hypothesize divergent molecular mechanisms of desert adaptation among deer mice, potentially tied to species-specific historical demography, which may limit or enhance adaptation. We identify a number of candidate loci experiencing selective sweeps in the P. crinitus genome that are implicated in osmoregulation (Trypsin, Prostasin) and metabolic tuning (Kallikrein, eIF2-alpha kinase GCN2, APPL1/2), which may be important for accommodating hot and dry environmental conditions.
英文关键词	dehydration desert parallel evolution Peromyscus thermoregulation
类型	Article
语种	英语
开放获取类型	Green Published, hybrid
收录类别	SCI-E
WOS记录号	WOS:000659449200006
WOS关键词	INTEGRATED STRESS-RESPONSE ; COMPENSATORY EVOLUTION ; HEMOGLOBIN-FUNCTION ; PROTEIN CATABOLISM ; POSITIVE SELECTION ; NATURAL-SELECTION ; ACUTE DEHYDRATION ; CLIMATE-CHANGE ; GENETIC-BASIS ; ADAPTATION
WOS类目	Evolutionary Biology ; Genetics & Heredity
WOS研究方向	Evolutionary Biology ; Genetics & Heredity
来源机构	University of Western Australia
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/350856
作者单位	[Colella, Jocelyn P.; Tigano, Anna; MacManes, Matthew D.] Univ New Hampshire, Dept Mol Cellular & Biomed Sci, 35 Colovos Rd,Fl 4, Durham, NH 03824 USA; [Colella, Jocelyn P.; Tigano, Anna; MacManes, Matthew D.] Univ New Hampshire, Hubbard Genome Ctr, Durham, NH 03824 USA; [Dudchenko, Olga; Omer, Arina D.; Khan, Ruqayya; Bochkov, Ivan D.; Aiden, Erez L.] Baylor Coll Med, Ctr Genome Architecture, Dept Mol & Human Genet, Houston, TX 77030 USA; [Dudchenko, Olga; Aiden, Erez L.] Rice Univ, Ctr Theoret & Biol Phys, Houston, TX 77030 USA; [Dudchenko, Olga; Khan, Ruqayya; Bochkov, Ivan D.; Aiden, Erez L.] Rice Univ, Dept Comp Sci, Dept Computat & Appl Math, Houston, TX 77030 USA; [Aiden, Erez L.] ShanghaiTech Univ, Shanghai Inst Adv Immunochem Studies, Shanghai 201210, Peoples R China; [Aiden, Erez L.] Univ Western Australia, Sch Agr & Environm, Perth, WA 6009, Australia; [Colella, Jocelyn P.] Univ Kansas, Biodivers Inst, Lawrence, KS 66045 USA
推荐引用方式 GB/T 7714	Colella, Jocelyn P.,Tigano, Anna,Dudchenko, Olga,et al. Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice[J]. University of Western Australia,2021,112(3):286-302.
APA	Colella, Jocelyn P..,Tigano, Anna.,Dudchenko, Olga.,Omer, Arina D..,Khan, Ruqayya.,...&MacManes, Matthew D..(2021).Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice.JOURNAL OF HEREDITY,112(3),286-302.
MLA	Colella, Jocelyn P.,et al."Limited Evidence for Parallel Evolution Among Desert-Adapted Peromyscus Deer Mice".JOURNAL OF HEREDITY 112.3(2021):286-302.