干旱区生态环境知识资源中心(Arid): Siccirubricoccus phaeus sp. nov., isolated from oil reservoir water and emended description of the genus Siccirubricoccus

Arid

DOI	10.1007/s10482-021-01516-8
	Siccirubricoccus phaeus sp. nov., isolated from oil reservoir water and emended description of the genus Siccirubricoccus
	Li, Fang-Ling; Zhang, Ya-Xi; Zhang, Ya-Kun; Chen, Wen-Feng; Li, Wen-Jun; Wang, Lei
通讯作者	Wang, L (corresponding author), China Agr Univ, State Key Lab Agrobiotechnol, Dept Microbiol & Immunol, Coll Biol Sci, Beijing 100193, Peoples R China.
来源期刊	ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
ISSN	0003-6072
EISSN	1572-9699
出版年	2021
卷号	114 期号:4 页码:355-364
英文摘要	A Gram-staining-negative, non-motile, aerobic bacterium, designated 1-3(T), was isolated from oil reservoir water collected from Liaohe oilfield, north-east of China. Growth was observed at 15-40 degrees C (optimum 37 degrees C) and pH 6-10 (optimum 7). The strain can grow under nitrogen-limiting condition. Phylogenetic analysis based on 16S rRNA gene sequences showed that the novel isolate was most closely related to Siccirubricoccus deserti SYSU D8009(T) (96.7%), followed by Paracraurococcus ruber NS89(T) (95.7%) and Belnapia rosea CPCC 100156(T) (94.9%). Genome sequencing revealed a genome size of 6.43 Mbp and a G+C content of 71.3 mol%. The average nucleotide identity values and digital DNA-DNA hybridization between 1-3(T) and the reference strains were all below the cut-off level (95-96% and 70%, respectively) for species delineation. The strain possessed the cytochrome P450 enzyme, which has the potential to degrade oil. The respiratory quinone was Q-10 and the major fatty acids were summed feature 8 (C-18:1 omega 7c/C-18:1 omega 6c, 38.8%), C-16:0 (25.6%) and C-19:0 cyclo omega 8c (22.5%). The polar lipids of strain 1-3(T) comprised diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine and three unidentified aminolipids. Based on the genotypic and phenotypic characteristics, strain 1-3(T) represents a novel species of genus Siccirubricoccus, for which the name Siccirubricoccus phaeus sp. nov. is proposed. The type strain of Siccirubricoccus phaeus is 1-3(T) (= CGMCC 1.16799(T) = LMG 31398(T)).
英文关键词	Siccirubricoccus phaeus sp nov Oil reservoir water Nitrogen-limiting condition
类型	Article
语种	英语
收录类别	SCI-E
WOS记录号	WOS:000615559200001
WOS类目	Microbiology
WOS研究方向	Microbiology
来源机构	中国农业大学
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/349477
作者单位	[Li, Fang-Ling; Zhang, Ya-Xi; Zhang, Ya-Kun; Chen, Wen-Feng; Wang, Lei] China Agr Univ, State Key Lab Agrobiotechnol, Dept Microbiol & Immunol, Coll Biol Sci, Beijing 100193, Peoples R China; [Li, Wen-Jun] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Peoples R China; [Li, Wen-Jun] Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Peoples R China
推荐引用方式 GB/T 7714	Li, Fang-Ling,Zhang, Ya-Xi,Zhang, Ya-Kun,et al. Siccirubricoccus phaeus sp. nov., isolated from oil reservoir water and emended description of the genus Siccirubricoccus[J]. 中国农业大学,2021,114(4):355-364.
APA	Li, Fang-Ling,Zhang, Ya-Xi,Zhang, Ya-Kun,Chen, Wen-Feng,Li, Wen-Jun,&Wang, Lei.(2021).Siccirubricoccus phaeus sp. nov., isolated from oil reservoir water and emended description of the genus Siccirubricoccus.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,114(4),355-364.
MLA	Li, Fang-Ling,et al."Siccirubricoccus phaeus sp. nov., isolated from oil reservoir water and emended description of the genus Siccirubricoccus".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 114.4(2021):355-364.