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DOI	10.1038/s41588-020-0690-6
	Analysis of wild tomato introgression lines elucidates the genetic basis of transcriptome and metabolome variation underlying fruit traits and pathogen response
	Szymanski, Jedrzej; Bocobza, Samuel; Panda, Sayantan; Sonawane, Prashant; Cardenas, Pablo D.; Lashbrooke, Justin; Kamble, Avinash; Shahaf, Nir; Meir, Sagit; Bovy, Arnaud; Beekwilder, Jules; Tikunov, Yury; Romero de la Fuente, Irene; Zamir, Dani; Rogachev, Ilana; Aharoni, Asaph
通讯作者	Szymanski, J ; Aharoni, A
来源期刊	NATURE GENETICS
ISSN	1061-4036
EISSN	1546-1718
出版年	2020
卷号	52 期号:10 页码:1111-+
英文摘要	Wild tomato species represent a rich gene pool for numerous desirable traits lost during domestication. Here, we exploited an introgression population representing wild desert-adapted species and a domesticated cultivar to establish the genetic basis of gene expression and chemical variation accompanying the transfer of wild-species-associated fruit traits. Transcriptome and metabolome analysis of 580 lines coupled to pathogen sensitivity assays resulted in the identification of genomic loci associated with levels of hundreds of transcripts and metabolites. These associations occurred in hotspots representing coordinated perturbation of metabolic pathways and ripening-related processes. Here, we identify components of theSolanumalkaloid pathway, as well as genes and metabolites involved in pathogen defense and linking fungal resistance with changes in the fruit ripening regulatory network. Our results outline a framework for understanding metabolism and pathogen resistance during tomato fruit ripening and provide insights into key fruit quality traits. A study of 580 tomato lines resulting from a cross between a wild desert-adapted species and a domesticated cultivar elucidates the genetic basis of gene expression and metabolite variation associated with fruit traits and defense against pathogens.
类型	Article
语种	英语
开放获取类型	Green Submitted
收录类别	SCI-E
WOS记录号	WOS:000573489300001
WOS关键词	BOTRYTIS-CINEREA ; DISEASE RESISTANCE ; SPECTROMETRY DATA ; EXPRESSION ; BIOSYNTHESIS ; SUSCEPTIBILITY ; GENOME ; ARABIDOPSIS ; POPULATION ; PENNELLII
WOS类目	Genetics & Heredity
WOS研究方向	Genetics & Heredity
来源机构	Hebrew University of Jerusalem
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/326545
作者单位	[Szymanski, Jedrzej; Bocobza, Samuel; Panda, Sayantan; Sonawane, Prashant; Shahaf, Nir; Meir, Sagit; Rogachev, Ilana; Aharoni, Asaph] Weizmann Inst Sci, Dept Plant & Environm Sci, Rehovot, Israel; [Panda, Sayantan] Agr Res Org, Gilat Res Ctr, Negev, Israel; [Cardenas, Pablo D.] Univ Copenhagen, Dept Plant & Environm Sci, Copenhagen, Denmark; [Lashbrooke, Justin] Stellenbosch Univ, Inst Wine Biotechnol, Fac AgriSci, Stellenbosch, South Africa; [Kamble, Avinash] Savitribai Phule Pune Univ, Dept Bot, Pune, Maharashtra, India; [Bovy, Arnaud; Tikunov, Yury; Romero de la Fuente, Irene] Wageningen Plant Res, Dept Plant Breeding, Wageningen, Netherlands; [Beekwilder, Jules] Wageningen Plant Res, BU Biosci, Wageningen, Netherlands; [Zamir, Dani] Hebrew Univ Jerusalem, Fac Agr, Rehovot, Israel; [Szymanski, Jedrzej] Leibniz Inst Plant Genet & Crop Plant Res IPK Gat, Dept Mol Genet, Seeland, Ot Gatersleben, Germany; [Bocobza, Samuel] Agr Res Org, Inst Plant Sci, Rishon Leziyyon, Israel; [Romero de la Fuente, Irene] I...
推荐引用方式 GB/T 7714	Szymanski, Jedrzej,Bocobza, Samuel,Panda, Sayantan,et al. Analysis of wild tomato introgression lines elucidates the genetic basis of transcriptome and metabolome variation underlying fruit traits and pathogen response[J]. Hebrew University of Jerusalem,2020,52(10):1111-+.
APA	Szymanski, Jedrzej.,Bocobza, Samuel.,Panda, Sayantan.,Sonawane, Prashant.,Cardenas, Pablo D..,...&Aharoni, Asaph.(2020).Analysis of wild tomato introgression lines elucidates the genetic basis of transcriptome and metabolome variation underlying fruit traits and pathogen response.NATURE GENETICS,52(10),1111-+.
MLA	Szymanski, Jedrzej,et al."Analysis of wild tomato introgression lines elucidates the genetic basis of transcriptome and metabolome variation underlying fruit traits and pathogen response".NATURE GENETICS 52.10(2020):1111-+.