干旱区生态环境知识资源中心(Arid): Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening

Arid

DOI	10.1038/s41598-020-61064-5
	Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening
	Zhao, Jianhua; Li, Haoxia; Yin, Yue; An, Wei; Qin, Xiaoya; Wang, Yajun; Li, Yanlong; Fan, Yunfang; Cao, Youlong
通讯作者	Cao, YL
来源期刊	SCIENTIFIC REPORTS
ISSN	2045-2322
出版年	2020
卷号	10 期号:1
英文摘要	Red wolfberry (or goji berry, Lycium barbarum; LB) is an important agricultural product with a high content of pharmacologically important secondary metabolites such as phenylpropanoids. A close relative, black wolfberry (L. ruthenicum; LR), endemic to the salinized deserts of northwestern China, is used only locally. The two fruits exhibit many morphological and phytochemical differences, but genetic mechanisms underlying them remain poorly explored. In order to identify the genes of interest for further studies, we studied transcriptomic (Illumina HiSeq) and metabolomic (LC-MS) profiles of the two fruits during five developmental stages (young to ripe). As expected, we identified much higher numbers of significantly differentially regulated genes (DEGs) than metabolites. The highest numbers were identified in pairwise comparisons including the first stage for both species, but total numbers were consistently somewhat lower for the LR. The number of differentially regulated metabolites in pairwise comparisons of developmental stages varied from 66 (stages 3 vs 4) to 133 (stages 2 vs 5) in both species. We identified a number of genes (e.g. AAT1, metE, pip) and metabolites (e.g. rutin, raffinose, galactinol, trehalose, citrulline and DL-arginine) that may be of interest to future functional studies of stress adaptation in plants. As LB is also highly suitable for combating soil desertification and alleviating soil salinity/alkalinity/pollution, its potential for human use may be much wider than its current, highly localized, relevance.
类型	Article
语种	英语
开放获取类型	gold, Green Published
收录类别	SCI-E
WOS记录号	WOS:000563347200005
WOS关键词	FALSE DISCOVERY RATE ; GALACTINOL-SYNTHASE ; DROUGHT STRESS ; ARGE HOMOLOG ; TOLERANCE ; TREHALOSE ; RESPONSES ; PLANTS ; GENES ; BIOSYNTHESIS
WOS类目	Multidisciplinary Sciences
WOS研究方向	Science & Technology - Other Topics
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/325855
作者单位	[Zhao, Jianhua; Yin, Yue; An, Wei; Qin, Xiaoya; Wang, Yajun; Li, Yanlong; Fan, Yunfang; Cao, Youlong] Ningxia Acad Agr & Forestry Sci, Wolfberry Engn Res Inst, Natl Wolfberry Engn Res Ctr, Yinchuan 750002, Ningxia, Peoples R China; [Li, Haoxia] Ningxia Acad Agr & Forestry Sci, Desertificat Control Res Inst, Yinchuan 750002, Ningxia, Peoples R China
推荐引用方式 GB/T 7714	Zhao, Jianhua,Li, Haoxia,Yin, Yue,et al. Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening[J],2020,10(1).
APA	Zhao, Jianhua.,Li, Haoxia.,Yin, Yue.,An, Wei.,Qin, Xiaoya.,...&Cao, Youlong.(2020).Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening.SCIENTIFIC REPORTS,10(1).
MLA	Zhao, Jianhua,et al."Transcriptomic and metabolomic analyses of Lycium ruthenicum and Lycium barbarum fruits during ripening".SCIENTIFIC REPORTS 10.1(2020).