干旱区生态环境知识资源中心(Arid): Transcriptome Profiling ofHaloxylon persicum(Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress

Arid

DOI	10.3390/genes11060640
	Transcriptome Profiling ofHaloxylon persicum(Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress
	Purayil, Fayas Thayale; Rajashekar, Balaji; Kurup, Shyam S.; Cheruth, Abdul Jaleel; Subramaniam, Sreeramanan; Tawfik, Nadia Hassan; Amiri, Khaled M. A.
通讯作者	Kurup, SS
来源期刊	GENES
EISSN	2073-4425
出版年	2020
卷号	11 期号:6
英文摘要	Haloxylon persicumis an endangered western Asiatic desert plant species, which survives under extreme environmental conditions. In this study, we focused on transcriptome analysis ofH. persicumto understand the molecular mechanisms associated with drought tolerance. Two different periods of polyethylene glycol (PEG)-induced drought stress (48 h and 72 h) were imposed onH. persicumunder in vitro conditions, which resulted in 18 million reads, subsequently assembled by de novo method with more than 8000 transcripts in each treatment. The N50 values were 1437, 1467, and 1524 for the control sample, 48 h samples, and 72 h samples, respectively. The gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis resulted in enrichment of mitogen-activated protein kinase (MAPK) and plant hormone signal transduction pathways under PEG-induced drought conditions. The differential gene expression analysis (DGEs) revealed significant changes in the expression pattern between the control and the treated samples. The KEGG analysis resulted in mapping transcripts with 138 different pathways reported in plants. The differential expression of drought-responsive transcription factors depicts the possible signaling cascades involved in drought tolerance. The present study provides greater insight into the fundamental transcriptome reprogramming of desert plants under drought.
英文关键词	Haloxylon persicum white saxaul drought resistant de novo transcriptome
类型	Article
语种	英语
开放获取类型	Green Published, gold
收录类别	SCI-E
WOS记录号	WOS:000555032800001
WOS关键词	LILY ASR PROTEIN ; FACTOR FAMILY ; WATER-STRESS ; EXPRESSION ; GENES ; RESPONSES ; ANNOTATION ; RESISTANCE ; TOLERANCE ; NETWORKS
WOS类目	Genetics & Heredity
WOS研究方向	Genetics & Heredity
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/325368
作者单位	[Purayil, Fayas Thayale; Kurup, Shyam S.; Cheruth, Abdul Jaleel; Tawfik, Nadia Hassan] United Arab Emirates Univ, Coll Food & Agr, Dept Integrat Agr, Al Ain 15551, U Arab Emirates; [Purayil, Fayas Thayale; Amiri, Khaled M. A.] United Arab Emirates Univ, Khalifa Ctr Genet Engn & Biotechnol, Al Ain 15551, U Arab Emirates; [Rajashekar, Balaji] Univ Tartu, Inst Comp Sci, EE-50409 Tartu, Estonia; [Rajashekar, Balaji] Celixa, Bangalore 560020, Karnataka, India; [Subramaniam, Sreeramanan] Univ Sains Malaysia USM, Sch Biol Sci, Georgetown 11800, Penang, Malaysia; [Amiri, Khaled M. A.] United Arab Emirates Univ, Coll Sci, Dept Biol, Al Ain 15551, U Arab Emirates
推荐引用方式 GB/T 7714	Purayil, Fayas Thayale,Rajashekar, Balaji,Kurup, Shyam S.,et al. Transcriptome Profiling ofHaloxylon persicum(Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress[J],2020,11(6).
APA	Purayil, Fayas Thayale.,Rajashekar, Balaji.,Kurup, Shyam S..,Cheruth, Abdul Jaleel.,Subramaniam, Sreeramanan.,...&Amiri, Khaled M. A..(2020).Transcriptome Profiling ofHaloxylon persicum(Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress.GENES,11(6).
MLA	Purayil, Fayas Thayale,et al."Transcriptome Profiling ofHaloxylon persicum(Bunge ex Boiss and Buhse) an Endangered Plant Species under PEG-Induced Drought Stress".GENES 11.6(2020).