干旱区生态环境知识资源中心(Arid): Complete genome sequence of the endophytic bacteriumCellulosimicrobiumsp. JZ28 isolated from the root endosphere of the perennial desert tussock grassPanicum turgidum

Arid

DOI	10.1007/s00203-020-01859-2
	Complete genome sequence of the endophytic bacteriumCellulosimicrobiumsp. JZ28 isolated from the root endosphere of the perennial desert tussock grassPanicum turgidum
	Eida, Abdul Aziz; Bougouffa, Salim; Alam, Intikhab; Saad, Maged M.; Hirt, Heribert
通讯作者	Saad, MM
来源期刊	ARCHIVES OF MICROBIOLOGY
ISSN	0302-8933
EISSN	1432-072X
出版年	2020
卷号	202 期号:6 页码:1563-1569
英文摘要	Cellulosimicrobiumsp. JZ28, a root endophytic bacterium from the desert plantPanicum turgidum, was previously identified as a plant growth-promoting bacterium. The genome of JZ28 consists of a 4378,193 bp circular chromosome and contains 3930 CDSs with an average GC content of 74.5%. Whole-genome sequencing analysis revealed that JZ28 was closely related toC. aquatile3 bp. The genome harbors genes responsible for protection against oxidative, osmotic and salinity stresses, such as the production of osmoprotectants. It also contains genes with a role in the production of volatiles, such as hydrogen sulfide, which promote biotic and abiotic stress tolerance in plants. The presence of three copies of chitinase genes indicates a possible role of JZ28 as biocontrol agent against fungal pathogens, while a number of genes for the degradation of plant biopolymers indicates potential application in industrial processes. Genome sequencing and mining of culture-dependent collections of bacterial endophytes from desert plants provide new opportunities for biotechnological applications.
英文关键词	Genome sequence Plant growth-promoting bacteria (PGPB) Endophyte Cellulosimicrobiumsp Desert microbes DARWIN21
类型	Article
语种	英语
收录类别	SCI-E
WOS记录号	WOS:000547458400031
WOS关键词	TREHALOSE METABOLISM ; STRESS TOLERANCE ; OSMOTIC-STRESS ; GROWTH ; GENE ; PLANTS ; RHIZOBACTERIA ; BIOSYNTHESIS ; RESOURCE ; BACTERIA
WOS类目	Microbiology
WOS研究方向	Microbiology
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/325001
作者单位	[Eida, Abdul Aziz; Saad, Maged M.; Hirt, Heribert] King Abdullah Univ Sci & Technol, DARWIN21, Biol & Environm Sci & Engn Div, Thuwal 239556900, Saudi Arabia; [Bougouffa, Salim; Alam, Intikhab] King Abdullah Univ Sci & Technol, Computat Biosci Res Ctr, Thuwal 239556900, Saudi Arabia; [Bougouffa, Salim] King Abdullah Univ Sci & Technol, BioSci Core Lab, Thuwal 239556900, Saudi Arabia; [Hirt, Heribert] Univ Vienna, Max F Perutz Labs, Dr Bohrgasse 9, A-1030 Vienna, Austria
推荐引用方式 GB/T 7714	Eida, Abdul Aziz,Bougouffa, Salim,Alam, Intikhab,et al. Complete genome sequence of the endophytic bacteriumCellulosimicrobiumsp. JZ28 isolated from the root endosphere of the perennial desert tussock grassPanicum turgidum[J],2020,202(6):1563-1569.
APA	Eida, Abdul Aziz,Bougouffa, Salim,Alam, Intikhab,Saad, Maged M.,&Hirt, Heribert.(2020).Complete genome sequence of the endophytic bacteriumCellulosimicrobiumsp. JZ28 isolated from the root endosphere of the perennial desert tussock grassPanicum turgidum.ARCHIVES OF MICROBIOLOGY,202(6),1563-1569.
MLA	Eida, Abdul Aziz,et al."Complete genome sequence of the endophytic bacteriumCellulosimicrobiumsp. JZ28 isolated from the root endosphere of the perennial desert tussock grassPanicum turgidum".ARCHIVES OF MICROBIOLOGY 202.6(2020):1563-1569.