干旱区生态环境知识资源中心(Arid): Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae

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DOI	10.1016/j.indcrop.2020.112461
	Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae
	Dharajiya, Darshan T.; Shah, Anshuman; Galvadiya, Bhemji P.; Patel, M. P.; Srivastava, Rishi; Pagi, Nalin K.; Solanki, S. D.; Parida, Swarup K.; Tiwari, Kapil K.
通讯作者	Tiwari, KK
来源期刊	INDUSTRIAL CROPS AND PRODUCTS
ISSN	0926-6690
EISSN	1872-633X
出版年	2020
卷号	151
英文摘要	Castor (Ricinus communis L.; 2n = 20) belongs to family Euphorbiaceae, is an industrially important non-edible oilseed crop which is widely cultivated in arid and semi-arid regions of the world. The demand for castor has kept increasing in the international market and to meet the demand, enhancement of genetic improvement in castor is very essential. Genome-wide availability of molecular markers is prerequisite for rapid genetic improvement of castor. Therefore, genome-wide microsatellite motifs from the draft genome of castor were identified (37,972) and utilized for primer designing in the present study. Among identified microsatellites, di-repeats (25,144) were most abundant followed by tri-repeats (10,636). A set of 304 primers was used for the validation of microsatellites markers in four genotypes of castor. Total 198 (65.13%) primers were amplified, among them 103 (52.02%) primers were polymorphic. Moreover, a set of 29 polymorphic microsatellites primer pairs was used for the cross-genera transferability study in five species of Euphorbiaceae viz., Jatropha multifida L., Euphorbia antiquorum L., E. milli Des Moul., E. thymifolia L., and E. neriifolia L. The maximum amplification of 68.97% was observed in E. antiquorum and minimum amplification of 31.03% was reported in J. multifida. Identified primers will facilitate to access the genetic diversity analysis, DNA fingerprinting, variety/hybrid identification, linkage map constructions, marker assisted breeding (MAB), association mapping, the discovery of quantitative trait loci (QTLs), genes among castor genotypes, and various species of Euphorbiaceae.
英文关键词	Castor (Ricinus communis L.) Euphorbiaceae Genome-wide microsatellites Cross transferability
类型	Article
语种	英语
收录类别	SCI-E
WOS记录号	WOS:000535703300028
WOS关键词	GENETIC DIVERSITY ; SSR MARKERS ; JATROPHA-CURCAS ; POLYMORPHISM
WOS类目	Agricultural Engineering ; Agronomy
WOS研究方向	Agriculture
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/324542
作者单位	[Dharajiya, Darshan T.; Shah, Anshuman; Galvadiya, Bhemji P.; Patel, M. P.; Pagi, Nalin K.; Solanki, S. D.; Tiwari, Kapil K.] Sardarkrushinagar Dantiwada Agr Univ SDAU, Dept Plant Mol Biol & Biotechnol, CP Coll Agr, Sardar Krushinagar 385506, Gujarat, India; [Dharajiya, Darshan T.; Shah, Anshuman; Galvadiya, Bhemji P.; Patel, M. P.; Pagi, Nalin K.; Solanki, S. D.; Tiwari, Kapil K.] Sardarkrushinagar Dantiwada Agr Univ SDAU, Dept Genet & Plant Breeding, CP Coll Agr, Sardar Krushinagar 385506, Gujarat, India; [Dharajiya, Darshan T.; Tiwari, Kapil K.] SDAU, Bio Sci Res Ctr, Sardar Krushinagar 385506, Gujarat, India; [Srivastava, Rishi; Parida, Swarup K.] Natl Inst Plant Genome Res NIPGR, Delhi 110067, India
推荐引用方式 GB/T 7714	Dharajiya, Darshan T.,Shah, Anshuman,Galvadiya, Bhemji P.,et al. Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae[J],2020,151.
APA	Dharajiya, Darshan T..,Shah, Anshuman.,Galvadiya, Bhemji P..,Patel, M. P..,Srivastava, Rishi.,...&Tiwari, Kapil K..(2020).Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae.INDUSTRIAL CROPS AND PRODUCTS,151.
MLA	Dharajiya, Darshan T.,et al."Genome-wide microsatellite markers in castor (Ricinus communis L.): Identification, development, characterization, and transferability in Euphorbiaceae".INDUSTRIAL CROPS AND PRODUCTS 151(2020).