干旱区生态环境知识资源中心(Arid): Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil

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DOI	10.1099/ijsem.0.004158
	Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil
	Asem, Mipeshwaree Devi 1,2,3; Salam, Nimaichand 1,2; Idris, Hamidah 4,5; Zhang, Xiao-Tong 1,2; Bull, Alan T.6; Li, Wen-Jun 1,2; Goodfellow, Michael 4
通讯作者	Li, Wen-Jun ; Goodfellow, Michael
来源期刊	INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
ISSN	1466-5026
EISSN	1466-5034
出版年	2020
卷号	70 期号:5 页码:3210-3218
英文摘要	The taxonomic status of a Nocardiopsis strain, designated H13(T), isolated from a high altitude Atacama Desert soil, was established by using a polyphasic approach. The strain was found to have chemotaxonomic, cultural and morphological characteristics consistent with its classification within the genus Nocardiopsis and formed a well-supported Glade in the Nocardiopsis phylogenomic tree together with the type strains of Nocardiopsis alborubida, Nocardiopsis dassonvillei and Nocardiopsis synnematoformans. Strain H13(T) was distinguished from its closest relatives by low average nucleotide identity (93.2-94.9%) and in silico DNA-DNA hybridization (52.5-62.4%) values calculated from draft genome assemblies and by a range of phenotypic properties. On the basis of these results, it is proposed that the isolate be assigned to the genus Nocardiopsis as Nocardiopsis deserti sp. nov. with isolate H13(T) (=CGMCC 4.7585(T)=KCTC 49249(T)) as the type strain.
英文关键词	Nocardiopsis deserti sp. nov polyphasic taxonomy genomics Atacama desert
类型	Article
语种	英语
国家	Peoples R China ; India ; England ; Malaysia
开放获取类型	Bronze, Green Accepted
收录类别	SCI-E
WOS记录号	WOS:000537392000032
WOS关键词	SAHARAN SOILS ; BACTERIAL ; GENOME ; GENUS ; IDENTIFICATION ; TAXONOMY ; CLASSIFICATION ; SEQUENCES ; CELLS ; ACID
WOS类目	Microbiology
WOS研究方向	Microbiology
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/318813
作者单位	1.Sun Yat Sen Univ, State Key Lab Biocontrol, Guangzhou 510275, Peoples R China; 2.Sun Yat Sen Univ, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Peoples R China; 3.Manipur Univ, Dept Biochem, Imphal 795003, India; 4.Newcastle Univ, Sch Nat & Environm Sci, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England; 5.Sultan Idris Educ Univ, Biol Dept, Tanjung Malim 35900, Malaysia; 6.Univ Kent, Sch Biosci, Canterbury CT2 1NJ, Kent, England
推荐引用方式 GB/T 7714	Asem, Mipeshwaree Devi,Salam, Nimaichand,Idris, Hamidah,et al. Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil[J],2020,70(5):3210-3218.
APA	Asem, Mipeshwaree Devi.,Salam, Nimaichand.,Idris, Hamidah.,Zhang, Xiao-Tong.,Bull, Alan T..,...&Goodfellow, Michael.(2020).Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,70(5),3210-3218.
MLA	Asem, Mipeshwaree Devi,et al."Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 70.5(2020):3210-3218.