干旱区生态环境知识资源中心(Arid): Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing

Arid

DOI	10.1080/17429145.2020.1750096
	Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing
	Chang, Yaling; Peng, Mengwen; Chu, Guangming; Wang, Mei
通讯作者	Chu, Guangming ; Wang, Mei
来源期刊	JOURNAL OF PLANT INTERACTIONS
ISSN	1742-9145
EISSN	1742-9153
出版年	2020
卷号	15 期号:1 页码:75-82
英文摘要	Anabasis aphylla is a salt and alkali resistant shrub grows in arid and semi-arid areas, which is also a constructive species of desert soil. To reveal the population structure and genetic diversity in populations of A. aphylla, a total of 106 samples were used as experimental materials for sequencing by specific-locus amplified fragment sequencing. In total, we obtained 300105 SNP which had high consistency. Phylogenetic tree of A. aphylla result showed there was a certain difference between these samples, which can be divided into two groups. The Shanon-Wiener index of A. aphylla was 0.4440 and the Nei diversity index was 0.2854. AMOVA analysis showed there was genetic differentiation among the seven groups to a certain level. The genetic diversity analysis showed the genetic variation of A. aphylla mainly from groups. This study provides a reference for further comprehensive study of the genetic structure and evolutionary adaptation of A. aphylla.
英文关键词	Anabasis aphylla SLAF-seq population structure genetic diversity
类型	Article
语种	英语
国家	Peoples R China
开放获取类型	gold
收录类别	SCI-E
WOS记录号	WOS:000526430000001
WOS关键词	IDENTIFICATION ; FORESTS
WOS类目	Plant Sciences ; Ecology
WOS研究方向	Plant Sciences ; Environmental Sciences & Ecology
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/315054
作者单位	Shihezi Univ, Agr Coll, Xinjiang, Shihezi, Peoples R China
推荐引用方式 GB/T 7714	Chang, Yaling,Peng, Mengwen,Chu, Guangming,et al. Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing[J],2020,15(1):75-82.
APA	Chang, Yaling,Peng, Mengwen,Chu, Guangming,&Wang, Mei.(2020).Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing.JOURNAL OF PLANT INTERACTIONS,15(1),75-82.
MLA	Chang, Yaling,et al."Genome-wide assessment of population structure and genetic diversity for Anabasis aphylla based on specific length amplification fragment sequencing".JOURNAL OF PLANT INTERACTIONS 15.1(2020):75-82.