Knowledge Resource Center for Ecological Environment in Arid Area
| DOI | 10.1111/mec.15029 |
| Integrating life history traits into predictive phylogeography | |
| Sullivan, Jack1,2; Smith, Megan L.3; Espindola, Anahi1,4; Ruffley, Megan1,2; Rankin, Andrew1,2; Tank, David1,2; Carstens, Bryan3 | |
| 通讯作者 | Sullivan, Jack |
| 来源期刊 | MOLECULAR ECOLOGY
 |
| ISSN | 0962-1083 |
| EISSN | 1365-294X |
| 出版年 | 2019 |
| 卷号 | 28期号:8页码:2062-2073 |
| 英文摘要 | Predictive phylogeography seeks to aggregate genetic, environmental and taxonomic data from multiple species in order to make predictions about unsampled taxa using machine-learning techniques such as Random Forests. To date, organismal trait data have infrequently been incorporated into predictive frameworks due to difficulties inherent to the scoring of trait data across a taxonomically broad set of taxa. We refine predictive frameworks from two North American systems, the inland temperate rainforests of the Pacific Northwest and the Southwestern Arid Lands (SWAL), by incorporating a number of organismal trait variables. Our results indicate that incorporating life history traits as predictor variables improves the performance of the supervised machine-learning approach to predictive phylogeography, especially for the SWAL system, in which predictions made from only taxonomic and climate variables meets only moderate success. In particular, traits related to reproduction (e.g., reproductive mode; clutch size) and trophic level appear to be particularly informative to the predictive framework. Predictive frameworks offer an important mechanism for integration of organismal trait, environmental data, and genetic data in phylogeographic studies. |
| 英文关键词 | comparative phylogeography cryptic diversity machine learning random forest |
| 类型 | Article |
| 语种 | 英语 |
| 国家 | USA |
| 开放获取类型 | Bronze |
| 收录类别 | SCI-E |
| WOS记录号 | WOS:000468200800016 |
| WOS关键词 | GENETIC-STRUCTURE ; PACIFIC-NORTHWEST ; PATTERNS ; DETERMINANTS ; VERTEBRATES ; DIVERSITY ; EVOLUTION ; UNCOVERS ; ECOLOGY ; IMPACT |
| WOS类目 | Biochemistry & Molecular Biology ; Ecology ; Evolutionary Biology |
| WOS研究方向 | Biochemistry & Molecular Biology ; Environmental Sciences & Ecology ; Evolutionary Biology |
| 资源类型 | 期刊论文 |
| 条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/217648 |
| 作者单位 | 1.Univ Idaho, Dept Biol Sci, Moscow, ID 83843 USA; 2.Univ Idaho, Inst Bioinformat & Evolutionary Studies, Moscow, ID 83843 USA; 3.Ohio State Univ, Dept Ecol Evolut & Organismal Biol, Columbus, OH 43210 USA; 4.Univ Maryland, Dept Entomol, College Pk, MD 20742 USA |
| 推荐引用方式 GB/T 7714 | Sullivan, Jack,Smith, Megan L.,Espindola, Anahi,et al. Integrating life history traits into predictive phylogeography[J],2019,28(8):2062-2073. |
| APA | Sullivan, Jack.,Smith, Megan L..,Espindola, Anahi.,Ruffley, Megan.,Rankin, Andrew.,...&Carstens, Bryan.(2019).Integrating life history traits into predictive phylogeography.MOLECULAR ECOLOGY,28(8),2062-2073. |
| MLA | Sullivan, Jack,et al."Integrating life history traits into predictive phylogeography".MOLECULAR ECOLOGY 28.8(2019):2062-2073. |
| 条目包含的文件 | 条目无相关文件。 | |||||
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