Arid
DOI10.1016/j.syapm.2018.01.006
Cyanobacteria inhabiting biological soil crusts of a polar desert: Sor Rondane Mountains, Antarctica
Pushkareva, Ekaterina1; Pessi, Igor S.2; Namsaraev, Zorigto3; Mano, Marie-Jose2; Elster, Josef1,4; Wilmotte, Annick2
通讯作者Pushkareva, Ekaterina
来源期刊SYSTEMATIC AND APPLIED MICROBIOLOGY
ISSN0723-2020
出版年2018
卷号41期号:4页码:363-373
英文摘要

Molecular and morphological methods were applied to study cyanobacterial community composition in biological soil crusts (BSCs) from four areas (two nunataks and two ridges) in the Sor Rondane Mountains, Antarctica. The sampling sites serve as control areas for open top chambers (OTCs) that were put in place in 2010 at the time of sample collection and will be compared with BSC samples taken from the OTCs in the future. Cyanobacterial cell biovolume was estimated using epifluorescence microscopy, which revealed the dominance of filamentous cyanobacteria in all studied sites except the Utsteinen ridge, where unicellular cyanobacteria were the most abundant. Cyanobacterial diversity was studied by a combination of molecular fingerprinting methods based on the 16S rRNA gene (denaturing gradient gel electrophoresis (DGGE) and 454 pyrosequencing) using cyanobacteria-specific primers. The number of DGGE sequences obtained per site was variable and, therefore, a high-throughput method was subsequently employed to improve the diversity coverage. Consistent with previous surveys in Antarctica, both methods showed that filamentous cyanobacteria, such as Leptolyngbya sp., Phormidium sp. and Microcoleus sp., were dominant in the studied sites.


In addition, the studied localities differed in substrate type, climatic conditions and soil parameters, which probably resulted in differences in cyanobacterial community composition. Furthermore, the BSC growing on gneiss pebbles had lower cyanobacterial abundances than BSCs associated with granitic substrates. (C) 2018 Elsevier GmbH. All rights reserved.


英文关键词BSC Cyanobacteria Antarctica DGGE 454 pyrosequencing Biovolume
类型Article
语种英语
国家Czech Republic ; Belgium ; Russia
收录类别SCI-E
WOS记录号WOS:000439923300012
WOS关键词DRY VALLEYS ; BACTERIAL DIVERSITY ; COMMUNITY STRUCTURE ; ECOLOGY ; ASSEMBLAGES ; PHOTOTROPHS ; MICROBES ; PRIMERS ; IMPACT
WOS类目Biotechnology & Applied Microbiology ; Microbiology
WOS研究方向Biotechnology & Applied Microbiology ; Microbiology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/213400
作者单位1.Univ South Bohemia, Ctr Polar Ecol, Zlate Stoce 3, Ceske Budejovice 37005, Czech Republic;
2.Univ Liege, InBioS Ctr Prot Engn, Allee Six Aout 13,B6a, B-4000 Liege, Belgium;
3.NRC Kurchatov Inst, Akad Kurchatova Pl 1, Moscow 123182, Russia;
4.Acad Sci Czech Republ, Inst Bot, Dukelska 135, CS-37982 Trebon, Czech Republic
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GB/T 7714
Pushkareva, Ekaterina,Pessi, Igor S.,Namsaraev, Zorigto,et al. Cyanobacteria inhabiting biological soil crusts of a polar desert: Sor Rondane Mountains, Antarctica[J],2018,41(4):363-373.
APA Pushkareva, Ekaterina,Pessi, Igor S.,Namsaraev, Zorigto,Mano, Marie-Jose,Elster, Josef,&Wilmotte, Annick.(2018).Cyanobacteria inhabiting biological soil crusts of a polar desert: Sor Rondane Mountains, Antarctica.SYSTEMATIC AND APPLIED MICROBIOLOGY,41(4),363-373.
MLA Pushkareva, Ekaterina,et al."Cyanobacteria inhabiting biological soil crusts of a polar desert: Sor Rondane Mountains, Antarctica".SYSTEMATIC AND APPLIED MICROBIOLOGY 41.4(2018):363-373.
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