Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1186/s40793-018-0315-1 |
High quality draft genome sequences of Mycoplasma agassizii strains PS6(T) and 723 isolated from Gopherus tortoises with upper respiratory tract disease | |
Alvarez-Ponce, David1; Weitzman, Chava L.1; Tillett, Richard L.2; Sandmeier, Franziska C.3; Tracy, C. Richard1 | |
通讯作者 | Alvarez-Ponce, David |
来源期刊 | STANDARDS IN GENOMIC SCIENCES
![]() |
ISSN | 1944-3277 |
出版年 | 2018 |
卷号 | 13 |
英文摘要 | Mycoplasma agassizii is one of the known causative agents of upper respiratory tract disease (URTD) in Mojave desert tortoises (Gopherus agassizii) and in gopher tortoises (Gopherus polyphemus). We sequenced the genomes of M. agassizii strains PS6(T) (ATCC 700616) and 723 (ATCC 700617) isolated from the upper respiratory tract of a Mojave desert tortoise and a gopher tortoise, respectively, both with signs of URTD. The PS6(T) genome assembly was organized in eight scaffolds, had a total length of 1,274,972 bp, a G + C content of 28.43%, and contained 979 protein-coding genes, 13 pseudogenes and 35 RNA genes. The 723 genome assembly was organized in 40 scaffolds, had a total length of 1,211,209 bp, a G + C content of 28.34%, and contained 955 protein-coding genes, seven pseudogenes, and 35 RNA genes. Both genomes exhibit a very similar organization and very similar numbers of genes in each functional category. Pairs of orthologous genes encode proteins that are 93.57% identical on average. Homology searches identified a putative cytadhesin. These genomes will enable studies that will help understand the molecular bases of pathogenicity of this and other Mycoplasma species. |
英文关键词 | Mycoplasma agassizii Desert tortoise Gopher tortoise Gopherus Upper respiratory tract disease (URTD) PS6(T) ATCC 700616 723 ATCC 700617 |
类型 | Article |
语种 | 英语 |
国家 | USA |
收录类别 | SCI-E |
WOS记录号 | WOS:000431107700001 |
WOS关键词 | RIBOSOMAL-RNA GENE ; DESERT TORTOISE ; PHYLOGENETIC ANALYSIS ; INFORMATION ; CLASSIFICATION ; ANNOTATION ; POLYPHEMUS ; ORGANISMS ; MORTALITY ; ALIGNMENT |
WOS类目 | Genetics & Heredity ; Microbiology |
WOS研究方向 | Genetics & Heredity ; Microbiology |
来源机构 | Colorado State University |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/213300 |
作者单位 | 1.Univ Nevada, Biol Dept, Reno, NV 89557 USA; 2.Univ Nevada, Nevada Ctr Bioinformat, Reno, NV 89557 USA; 3.Colorado State Univ, Biol Dept, Pueblo, CO USA |
推荐引用方式 GB/T 7714 | Alvarez-Ponce, David,Weitzman, Chava L.,Tillett, Richard L.,et al. High quality draft genome sequences of Mycoplasma agassizii strains PS6(T) and 723 isolated from Gopherus tortoises with upper respiratory tract disease[J]. Colorado State University,2018,13. |
APA | Alvarez-Ponce, David,Weitzman, Chava L.,Tillett, Richard L.,Sandmeier, Franziska C.,&Tracy, C. Richard.(2018).High quality draft genome sequences of Mycoplasma agassizii strains PS6(T) and 723 isolated from Gopherus tortoises with upper respiratory tract disease.STANDARDS IN GENOMIC SCIENCES,13. |
MLA | Alvarez-Ponce, David,et al."High quality draft genome sequences of Mycoplasma agassizii strains PS6(T) and 723 isolated from Gopherus tortoises with upper respiratory tract disease".STANDARDS IN GENOMIC SCIENCES 13(2018). |
条目包含的文件 | 条目无相关文件。 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。