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Simultaneous effects of future climate and irrigation intensification on surface and groundwater systems are not well understood. Efforts are needed to understand the future groundwater availability and associated surface flows under business-as-usual management to formulate policy changes to improve water sustainability. We combine measurements with integrated modeling (MIKE SHE/MIKE11) to evaluate the effects of future climate (2040-2069), with and without irrigation expansion, on water levels and flows in an agricultural watershed in low-storage crystalline aquifer region of south India. Demand and supply management changes, including improved efficiency of irrigation water as well as energy uses, were evaluated. Increased future rainfall (7-43%, from 5 Global Climate Models) with no further expansion of irrigation wells increased the groundwater recharge (10-55%); however, most of the recharge moved out of watershed as increased baseflow(17-154%) with a small increase in net recharge (+0.2 mm/year). When increased rainfall was considered with projected increase in irrigation withdrawals, both hydrologic extremes of well drying and flooding were predicted. A 100-year flow event was predicted to be a 5-year event in the future. If irrigation expansion follows the historical trends, earlier and more frequent well drying, a source of farmers’ distress in India, was predicted to worsen in the future despite the recharge gains from increased rainfall. Storage and use of excess flows, improved irrigation efficiency with flood to drip conversion in 25% of irrigated area, and reduced energy subsidy (free electricity for 3.5 h compared to 7 h/day; $ 1 billion savings) provided sufficient water savings to support future expansion in irrigated areas while mitigating well drying as well as flooding. Reductions in energy subsidy to fund the implementation of economically desirable (high benefit-cost ratio) demand (drip irrigation) and supply (water capture and storage) management was recommended to achieve a sustainable food-water-energy nexus in semi-arid regions. (c) 2018 Elsevier B.V. All rights reserved.