Arid
DOI10.3389/fpls.2017.01989
Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers
Wang, Zhe1,2; Zeng, Yanfei3; Zhang, Zhendong1; Sheng, Songbai1; Tian, Ju4; Wu, Rongling2; Pang, Xiaoming1
通讯作者Pang, Xiaoming
来源期刊FRONTIERS IN PLANT SCIENCE
ISSN1664-462X
出版年2017
卷号8
英文摘要

There is evidence that a band of dry climate separated plants in East Asia into distinct northern and southern groups. However, few studies have focused on the arid belt in this region, especially with regard to plants. We analyzed genetic variation in 22 populations of Siberian apricot (Prunus sibirica L.), a temperate deciduous species distributed in this arid belt, using two chloroplast DNA (cpDNA) sequences, seven chloroplast microsatellite loci (cpSSRs), and 31 nuclear microsatellite loci (nSSRs), to study its phylogeography. Chloroplast data showed the complete fixation of two different genetic groups: the eastern and western groups. Genetic differentiation between the two groups was significant (F-ST = 0.90925, p < 0.01). This pronounced phylogeographic break was also indicated by nSSR data, but there were disparities regarding individual populations. An asymmetric gene flow via pollen and seeds likely resulted in discordance between the present-day geography of nuclear and chloroplast lineages. There was a distinct boundary between the two large groups, which were fixed for two of the most ancestral chlorotypes. Two populations with the highest chloroplast genetic diversity were located in the Yanshan Mountains and Jinzhou, considered to be the glacial refugia. The split of chloroplasts between the eastern and western groups was estimated to have occurred similar to 0.1795Ma, whereas nuclear divergence occurred approximately 13,260 years ago. Linear regression analysis showed that climatic factors (annual precipitation and annual mean temperature) had a significant correlation with mean ancestry value (P < 0.05) indicated that they were potential factors for the formation of the two groups. In addition, this boundary was a contact zone between two groups from different refugia.


英文关键词cpDNA cpSSR glacial refugia Northern China phylogeography Prunus sibirica
类型Article
语种英语
国家Peoples R China
收录类别SCI-E
WOS记录号WOS:000415793300001
WOS关键词MAXIMUM-LIKELIHOOD-ESTIMATION ; MULTILOCUS GENOTYPE DATA ; GENETIC DIVERSITY ; NONCODING REGIONS ; UNIVERSAL PRIMERS ; PLANT-POPULATIONS ; EAST-ASIA ; SEQUENCE ; TEMPERATE ; NUCLEAR
WOS类目Plant Sciences
WOS研究方向Plant Sciences
来源机构北京林业大学
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/199108
作者单位1.Beijing Forestry Univ, Beijing Adv Innovat Ctr Tree Breeding Mol Design, Natl Engn Lab Tree Breeding,Minist Educ,Coll Biol, Key Lab Genet & Breeding Forest Trees & Ornamenta, Beijing, Peoples R China;
2.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Ctr Computat Biol, Beijing, Peoples R China;
3.Chinese Acad Forestry, State Key Lab Tree Genet & Breeding, Beijing, Peoples R China;
4.Inner Mongolia Hesheng Ecol Sci & Technol Res Ins, Hohhot, Peoples R China
推荐引用方式
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Wang, Zhe,Zeng, Yanfei,Zhang, Zhendong,et al. Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers[J]. 北京林业大学,2017,8.
APA Wang, Zhe.,Zeng, Yanfei.,Zhang, Zhendong.,Sheng, Songbai.,Tian, Ju.,...&Pang, Xiaoming.(2017).Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers.FRONTIERS IN PLANT SCIENCE,8.
MLA Wang, Zhe,et al."Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers".FRONTIERS IN PLANT SCIENCE 8(2017).
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