Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.3389/fpls.2017.01989 |
Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers | |
Wang, Zhe1,2; Zeng, Yanfei3; Zhang, Zhendong1; Sheng, Songbai1; Tian, Ju4; Wu, Rongling2; Pang, Xiaoming1 | |
通讯作者 | Pang, Xiaoming |
来源期刊 | FRONTIERS IN PLANT SCIENCE
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ISSN | 1664-462X |
出版年 | 2017 |
卷号 | 8 |
英文摘要 | There is evidence that a band of dry climate separated plants in East Asia into distinct northern and southern groups. However, few studies have focused on the arid belt in this region, especially with regard to plants. We analyzed genetic variation in 22 populations of Siberian apricot (Prunus sibirica L.), a temperate deciduous species distributed in this arid belt, using two chloroplast DNA (cpDNA) sequences, seven chloroplast microsatellite loci (cpSSRs), and 31 nuclear microsatellite loci (nSSRs), to study its phylogeography. Chloroplast data showed the complete fixation of two different genetic groups: the eastern and western groups. Genetic differentiation between the two groups was significant (F-ST = 0.90925, p < 0.01). This pronounced phylogeographic break was also indicated by nSSR data, but there were disparities regarding individual populations. An asymmetric gene flow via pollen and seeds likely resulted in discordance between the present-day geography of nuclear and chloroplast lineages. There was a distinct boundary between the two large groups, which were fixed for two of the most ancestral chlorotypes. Two populations with the highest chloroplast genetic diversity were located in the Yanshan Mountains and Jinzhou, considered to be the glacial refugia. The split of chloroplasts between the eastern and western groups was estimated to have occurred similar to 0.1795Ma, whereas nuclear divergence occurred approximately 13,260 years ago. Linear regression analysis showed that climatic factors (annual precipitation and annual mean temperature) had a significant correlation with mean ancestry value (P < 0.05) indicated that they were potential factors for the formation of the two groups. In addition, this boundary was a contact zone between two groups from different refugia. |
英文关键词 | cpDNA cpSSR glacial refugia Northern China phylogeography Prunus sibirica |
类型 | Article |
语种 | 英语 |
国家 | Peoples R China |
收录类别 | SCI-E |
WOS记录号 | WOS:000415793300001 |
WOS关键词 | MAXIMUM-LIKELIHOOD-ESTIMATION ; MULTILOCUS GENOTYPE DATA ; GENETIC DIVERSITY ; NONCODING REGIONS ; UNIVERSAL PRIMERS ; PLANT-POPULATIONS ; EAST-ASIA ; SEQUENCE ; TEMPERATE ; NUCLEAR |
WOS类目 | Plant Sciences |
WOS研究方向 | Plant Sciences |
来源机构 | 北京林业大学 |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/199108 |
作者单位 | 1.Beijing Forestry Univ, Beijing Adv Innovat Ctr Tree Breeding Mol Design, Natl Engn Lab Tree Breeding,Minist Educ,Coll Biol, Key Lab Genet & Breeding Forest Trees & Ornamenta, Beijing, Peoples R China; 2.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Ctr Computat Biol, Beijing, Peoples R China; 3.Chinese Acad Forestry, State Key Lab Tree Genet & Breeding, Beijing, Peoples R China; 4.Inner Mongolia Hesheng Ecol Sci & Technol Res Ins, Hohhot, Peoples R China |
推荐引用方式 GB/T 7714 | Wang, Zhe,Zeng, Yanfei,Zhang, Zhendong,et al. Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers[J]. 北京林业大学,2017,8. |
APA | Wang, Zhe.,Zeng, Yanfei.,Zhang, Zhendong.,Sheng, Songbai.,Tian, Ju.,...&Pang, Xiaoming.(2017).Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers.FRONTIERS IN PLANT SCIENCE,8. |
MLA | Wang, Zhe,et al."Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers".FRONTIERS IN PLANT SCIENCE 8(2017). |
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