Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.7554/eLife.25783 |
The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization | |
Nelson, David R.1,2; Khraiwesh, Basel1,2; Fu, Weiqi1; Alseekh, Saleh3; Jaiswal, Ashish1; Chaiboonchoe, Amphun1; Hazzouri, Khaled M.2; O’Connor, Matthew J.4; Butterfoss, Glenn L.2; Drou, Nizar2; Rowe, Jillian D.2; Harb, Jamil3,5; Fernie, Alisdair R.3; Gunsalus, Kristin C.2,6,7; Salehi-Ashtiani, Kourosh1,2 | |
通讯作者 | Nelson, David R. ; Salehi-Ashtiani, Kourosh |
来源期刊 | ELIFE
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ISSN | 2050-084X |
出版年 | 2017 |
卷号 | 6 |
英文摘要 | To investigate the phenomic and genomic traits that allow green algae to survive in deserts, we characterized a ubiquitous species, Chloroidium sp. UTEX 3007, which we isolated from multiple locations in the United Arab Emirates (UAE). Metabolomic analyses of Chloroidium sp. UTEX 3007 indicated that the alga accumulates a broad range of carbon sources, including several desiccation tolerance-promoting sugars and unusually large stores of palmitate. Growth assays revealed capacities to grow in salinities from zero to 60 g/L and to grow heterotrophically on >40 distinct carbon sources. Assembly and annotation of genomic reads yielded a 52.5 Mbp genome with 8153 functionally annotated genes. Comparison with other sequenced green algae revealed unique protein families involved in osmotic stress tolerance and saccharide metabolism that support phenomic studies. Our results reveal the robust and flexible biology utilized by a green alga to successfully inhabit a desert coastline. |
类型 | Article |
语种 | 英语 |
国家 | U Arab Emirates ; Germany ; Palestine ; USA |
收录类别 | SCI-E |
WOS记录号 | WOS:000405378200001 |
WOS关键词 | MANGANESE CATALASE ; L-GLUCOSE ; DIACYLGLYCEROL ACYLTRANSFERASE ; PROTEIN ; TOLERANCE ; ENZYME ; DESICCATION ; EVOLUTION ; STRESS ; GENE |
WOS类目 | Biology |
WOS研究方向 | Life Sciences & Biomedicine - Other Topics |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/198578 |
作者单位 | 1.New York Univ Abu Dhabi, Div Sci & Math, Lab Algal Synthet & Syst Biol, Abu Dhabi, U Arab Emirates; 2.New York Univ Abu Dhabi, Ctr Genom & Syst Biol, Abu Dhabi, U Arab Emirates; 3.Max Planck Inst Mol Plant Physiol, Potsdam, Germany; 4.New York Univ Abu Dhabi, Core Technol Platform, Abu Dhabi, U Arab Emirates; 5.Birzeit Univ, Dept Biol & Biochem, Birzeit, Palestine; 6.NYU, Ctr Genom & Syst Biol, New York, NY USA; 7.NYU, Dept Biol, New York, NY 10003 USA |
推荐引用方式 GB/T 7714 | Nelson, David R.,Khraiwesh, Basel,Fu, Weiqi,et al. The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization[J],2017,6. |
APA | Nelson, David R..,Khraiwesh, Basel.,Fu, Weiqi.,Alseekh, Saleh.,Jaiswal, Ashish.,...&Salehi-Ashtiani, Kourosh.(2017).The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization.ELIFE,6. |
MLA | Nelson, David R.,et al."The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization".ELIFE 6(2017). |
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