Arid
DOI10.1007/s11033-016-4012-0
Molecular cloning, characterization and expression analysis of a heat shock protein 10 (Hsp10) from Pennisetum glaucum (L.), a C-4 cereal plant from the semi-arid tropics
Nitnavare, Rahul B.1; Yeshvekar, Richa K.1; Sharma, Kiran K.1; Vadez, Vincent1; Reddy, Malireddy K.2; Reddy, Palakolanu Sudhakar1,2
通讯作者Reddy, Palakolanu Sudhakar
来源期刊MOLECULAR BIOLOGY REPORTS
ISSN0301-4851
EISSN1573-4978
出版年2016
卷号43期号:8页码:861-870
英文摘要

Heat shock proteins (Hsp10) belong to the ubiquitous family of heat-shock molecular chaperones found in the organelles of both prokaryotes and eukaryotes. Chaperonins assist the folding of nascent and stress-destabilized proteins. A cDNA clone encoding a 10 kDa Hsp was isolated from pearl millet, Pennisetum glaucum (L.) by screening a heat stress cDNA library. The fulllength PgHsp10 cDNA consisted of 297 bp open reading frame (ORF) encoding a 98 amino acid polypeptide with a predicted molecular mass of 10.61 kDa and an estimated isoelectric point (pI) of 7.95. PgHsp10 shares 70-98 % sequence identity with other plant homologs. Phylogenetic analysis revealed that PgHsp10 is evolutionarily close to the maize Hsp10 homolog. The predicted 3D model confirmed a conserved eight-stranded -barrel with active site between the -barrel comprising of eight-strands, with conserved domain VLLPEYGG sandwiched between two -sheets. The gene consisted of 3 exons and 2 introns, while the position and phasing of these introns were conserved similar to other plant Hsp10 family genes. In silico analysis of the promoter region of PgHsp10 presented several distinct set of cis-elements and transcription factor binding sites. Quantitative RT-PCR analysis showed that PgHsp10 gene was differentially expressed in response to abiotic stresses with the highest level of expression under heat stress conditions. Results of this study provide useful information regarding the role of chaperonins in stress regulation and generated leads for further elucidation of their function in plant stress tolerance.


英文关键词ABA Heat stress cDNA library Chaperonin Pennisetum glaucum
类型Article
语种英语
国家India
收录类别SCI-E
WOS记录号WOS:000379860800012
WOS关键词ACTING REGULATORY ELEMENTS ; STRESS TOLERANCE ; ARABIDOPSIS-THALIANA ; DROUGHT TOLERANCE ; GENE-EXPRESSION ; HIGH-THROUGHPUT ; ABIOTIC STRESS ; PEARL-MILLET ; ZEA-MAYS ; CHAPERONINS
WOS类目Biochemistry & Molecular Biology
WOS研究方向Biochemistry & Molecular Biology
来源机构International Crops Research Institute for the Semi-Arid Tropics
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/195092
作者单位1.Int Crops Res Inst Semi Arid Trop, Hyderabad 502324, Telangana, India;
2.ICGEB, Plant Mol Biol Grp, Aruna Asaf Ali Marg, New Delhi 110067, India
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Nitnavare, Rahul B.,Yeshvekar, Richa K.,Sharma, Kiran K.,et al. Molecular cloning, characterization and expression analysis of a heat shock protein 10 (Hsp10) from Pennisetum glaucum (L.), a C-4 cereal plant from the semi-arid tropics[J]. International Crops Research Institute for the Semi-Arid Tropics,2016,43(8):861-870.
APA Nitnavare, Rahul B.,Yeshvekar, Richa K.,Sharma, Kiran K.,Vadez, Vincent,Reddy, Malireddy K.,&Reddy, Palakolanu Sudhakar.(2016).Molecular cloning, characterization and expression analysis of a heat shock protein 10 (Hsp10) from Pennisetum glaucum (L.), a C-4 cereal plant from the semi-arid tropics.MOLECULAR BIOLOGY REPORTS,43(8),861-870.
MLA Nitnavare, Rahul B.,et al."Molecular cloning, characterization and expression analysis of a heat shock protein 10 (Hsp10) from Pennisetum glaucum (L.), a C-4 cereal plant from the semi-arid tropics".MOLECULAR BIOLOGY REPORTS 43.8(2016):861-870.
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