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DOI | 10.1007/s12275-016-6361-8 |
Deinococcus sedimenti sp nov isolated from river sediment | |
Lee, Jae-Jin1; Lee, Yeon-Hee1; Park, Su-Jin1; Lim, Sangyong2; Jeong, Sun-Wook2; Lee, Seung-Yeol1; Park, Sangkyu1; Choi, Hyo-Won3; Kim, Myung Kyum4; Jung, Hee-Young1,5 | |
通讯作者 | Jung, Hee-Young |
来源期刊 | JOURNAL OF MICROBIOLOGY
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ISSN | 1225-8873 |
EISSN | 1976-3794 |
出版年 | 2016 |
卷号 | 54期号:12页码:802-808 |
英文摘要 | A novel Gram-positive, oval-shaped, non-motile bacterium designated strain 16F1L(T) was isolated from sediment collected from the Han River in Seoul, Republic of Korea. Based on the 16S rRNA gene sequence (1,448 bp), this strain was identified as a member of the genus Deinococcus that belongs to the class Deinococci. Similarities in the 16S rRNA gene sequence were shown with Deinococcus daejeonensis MJ27(T) (99.0%), D. grandis DSM 3963(T) (98.1%), D. radiotolerans C1(T) (97.5%), and D. caeni Ho-08(T) (97.2%). Strain 16F1L(T) was classified as a different genomic species from closely related Deinococcus members, based on less than 70% DNA-DNA relatedness. Genomic DNA G+C content of strain 16F1L(T) was 67.2 mol%. Strain 16F1L(T) was found to grow at temperatures of 10-37A degrees C (optimum 25A degrees C) and pH 7-8 (optimum pH 7) on R2A medium, and was catalase-positive and oxidase-negative. Strain 16F1L(T) showed resistance to gamma radiation (D-10 > 2 kGy). In addition, this strain had the following chemotaxonomic characteristics: the major fatty acids were C-15:1 omega 6c and C-16:1 omega 7c; the polar lipid profile contained phosphoglycolipids, unknown aminophospholipids, an unknown aminoglycolipid, unknown aminolipids, an unknown glycolipid, an unknown phospholipid, and an unknown polar lipid; the major quinone was MK-8. Phylogenetic, genotypic, phenotypic, and chemotaxonomic characteristics indicated that strain 16F1L(T) represents a novel species within the genus Deinococcus, for which the name Deinococcus sedimenti sp. nov. is proposed. The type strain is 16F1L(T) (=KCTC 33796(T) =JCM 31405(T)). |
英文关键词 | Deinococcus polyphasic taxonomy Gamma radiation-resistance |
类型 | Article |
语种 | 英语 |
国家 | South Korea |
收录类别 | SCI-E |
WOS记录号 | WOS:000388991900003 |
WOS关键词 | PERFORMANCE LIQUID-CHROMATOGRAPHY ; DEOXYRIBONUCLEIC-ACID ; IONIZING-RADIATION ; ACTIVATED-SLUDGE ; DESERT SOIL ; GEN-NOV ; BACTERIUM ; AMPLIFICATION ; RADIODURANS ; DIVERSITY |
WOS类目 | Microbiology |
WOS研究方向 | Microbiology |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/194626 |
作者单位 | 1.Kyungpook Natl Univ, Sch Appl Biosci, Daegu 41566, South Korea; 2.Korea Atom Energy Res Inst, Radiat Res Div Biotechnol, Jeongeup 56212, South Korea; 3.RDA, Natl Inst Agr Sci, Wonju 55365, South Korea; 4.Seoul Womens Univ, Dept Bio & Environm Technol, Coll Nat Sci, Seoul 01797, South Korea; 5.Kyungpook Natl Univ, Inst Plant Med, Daegu 41566, South Korea |
推荐引用方式 GB/T 7714 | Lee, Jae-Jin,Lee, Yeon-Hee,Park, Su-Jin,et al. Deinococcus sedimenti sp nov isolated from river sediment[J],2016,54(12):802-808. |
APA | Lee, Jae-Jin.,Lee, Yeon-Hee.,Park, Su-Jin.,Lim, Sangyong.,Jeong, Sun-Wook.,...&Jung, Hee-Young.(2016).Deinococcus sedimenti sp nov isolated from river sediment.JOURNAL OF MICROBIOLOGY,54(12),802-808. |
MLA | Lee, Jae-Jin,et al."Deinococcus sedimenti sp nov isolated from river sediment".JOURNAL OF MICROBIOLOGY 54.12(2016):802-808. |
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