Arid
DOI10.1099/ijsem.0.000825
Deinococcus actinosclerus sp nov., a novel bacterium isolated from soil of a rocky hillside
Joo, Eun Sun1; Lee, Jae Jin1; Kang, Myung-Suk2; Lim, Sangyong3; Jeong, Sun-Wook3; Kim, Eun Bit1; Jeon, Seon Hwa1; Srinivasan, Sathiyaraj1; Kim, Myung Kyum1
通讯作者Kim, Myung Kyum
来源期刊INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
ISSN1466-5026
EISSN1466-5034
出版年2016
卷号66页码:1003-1008
英文摘要

Three Gram-stain-positive, catalase- and oxidase-positive coccus- or rod-shaped bacterial strains, designated BM2(T), BM4 and BM5, were isolated from soil in South Korea. They showed strong resistance to gamma radiation with a D-10 value of 9 kGy but weak UVC resistance. The 16S rRNA sequences of strains BM2(T), BM4 and BM5 represent a novel subline within the genus Deinococcus in the family Deinococcaceae. The 16S rRNA gene sequences of strains BM2(T), BM4 and BM5 were indistinguishable and showed 98.1-87.3 % similarity with other species of the genus Deinococcus. Strain BM2(T) exhibited relatively high levels of DNA-DNA hybridization with BM4 (87 +/- 0.8 %) and BM5 (92 +/- 1.2 %). Meanwhile, it showed a low level of DNA-DNA hybridization (<30 %) with other closely related species of the genus Deinococcus. The strains showed the typical chemotaxonomic characteristics of the genus Deinococcus, with the presence of menaquinone 8 as the respiratory quinone; the major fatty acids were summed feature 3 (composed of C-16 : 1 omega 7c/C-16 : 1 omega 6c), C-15 : 1 omega 6c and C-16 : 0. The DNA G+C content of strain BM2(T) was 69.7 mol%. The polar lipid profile included major amounts of phosphatidylglycerol, phosphatidylcholine and an unknown aminolipid. On the basis of phenotypic and genotypic properties, and phylogenetic distinctiveness, strains BM2(T), BM4 and BM5 should be classified in a novel species in the genus Deinococcus, for which the name Deinococcus actinosclerus sp. nov. is proposed. The type strain is BM2(T) (=KEMB 5401-184(T)=JCM 30700(T)); reference strains are BM4 (=JCM 30701) and BM5 (=JCM 30702).


类型Article
语种英语
国家South Korea
收录类别SCI-E
WOS记录号WOS:000372335600071
WOS关键词COMPLETE GENOME SEQUENCE ; GAMMA-RADIATION ; SOUTH-KOREA ; RICE FIELD ; RESISTANT ; DIVERSITY ; DESERT ; SLUDGE ; WATER
WOS类目Microbiology
WOS研究方向Microbiology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/193804
作者单位1.Seoul Womens Univ, Coll Nat Sci, Dept Bio & Environm Technol, Seoul 139774, South Korea;
2.Natl Inst Biol Resources, Microorganism Resources Div, Inchon 404107, South Korea;
3.Korea Atom Energy Res Inst, Radiat Res Div Biotechnol, Jeongeup 580185, South Korea
推荐引用方式
GB/T 7714
Joo, Eun Sun,Lee, Jae Jin,Kang, Myung-Suk,et al. Deinococcus actinosclerus sp nov., a novel bacterium isolated from soil of a rocky hillside[J],2016,66:1003-1008.
APA Joo, Eun Sun.,Lee, Jae Jin.,Kang, Myung-Suk.,Lim, Sangyong.,Jeong, Sun-Wook.,...&Kim, Myung Kyum.(2016).Deinococcus actinosclerus sp nov., a novel bacterium isolated from soil of a rocky hillside.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,66,1003-1008.
MLA Joo, Eun Sun,et al."Deinococcus actinosclerus sp nov., a novel bacterium isolated from soil of a rocky hillside".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66(2016):1003-1008.
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