Arid
DOI10.3389/fmicb.2016.00150
The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity
Fonseca-Garcia, Citlali1; Coleman-Derr, Devin2,3,4; Garrido, Etzel1,6; Visel, Axel2,3,5; Tringe, Susannah G.2,3,5; Partida-Martinez, Laila P.1
通讯作者Partida-Martinez, Laila P.
来源期刊FRONTIERS IN MICROBIOLOGY
ISSN1664-302X
出版年2016
卷号7
英文摘要

Cactaceae represents one of the most species-rich families of succulent plants native to arid and semi-arid ecosystems, yet the associations Cacti establish with microorganisms and the rules governing microbial community assembly remain poorly understood. We analyzed the composition, diversity, and factors influencing above- and below-ground bacterial, archaeal, and fungal communities associated with two native and sympatric Cacti species: Myrtillocactus geometrizans and Opuritia robusta. Phylogenetic profiling showed that the composition and assembly of microbial communities associated with Cacti were primarily influenced by the plant compartment; plant species, site, and season played only a minor role. Remarkably, bacterial, and archaeal diversity was higher in the phyllosphere than in the rhizosphere of Cacti, while the opposite was true for fungi. Semi-arid soils exhibited the highest levels of microbial diversity whereas the stem endosphere the lowest. Despite their taxonomic distance, M. geometrizans and O. robusta shared most microbial taxa in all analyzed compartments. Influence of the plant host did only play a larger role in the fungal communities of the stem endosphere. These results suggest that fungi establish specific interactions with their host plant inside the stem, whereas microbial communities in the other plant compartments may play similar functional roles in these two species. Biochemical and molecular characterization of seed-borne bacteria of Cacti supports the idea that these microbial symbionts may be vertically inherited and could promote plant growth and drought tolerance for the fitness of the Cacti holobiont. We envision this knowledge will help improve and sustain agriculture in arid and semi-arid regions of the world.


英文关键词arid and semi-arid ecosystems Cactaceae CAM plants holobiont Illumina amplicon sequencing microbial diversity microbiomes plant-microbe interactions
类型Article
语种英语
国家Mexico ; USA
收录类别SCI-E
WOS记录号WOS:000369946600001
WOS关键词BACTERIAL ROOT MICROBIOTA ; WEATHERING DESERT PLANTS ; ENDOPHYTIC BACTERIA ; RHIZOSPHERE MICROBIOME ; COMMUNITY STRUCTURE ; FUNGAL ENDOPHYTES ; GROWTH PROMOTION ; DIVERSITY ; SOIL ; POPULATIONS
WOS类目Microbiology
WOS研究方向Microbiology
来源机构University of California, Berkeley
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/193047
作者单位1.Ctr Invest & Estudios Avanzados, Dept Ingn Genet, Irapuato, Mexico;
2.Joint Genome Inst, Dept Energy, Walnut Creek, CA USA;
3.Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Environm Genom & Syst Biol Div, Berkeley, CA 94720 USA;
4.ARS, Ctr Plant Gene Express, USDA, Albany, CA USA;
5.Univ Calif Merced, Sch Nat Sci, Mol Cell Biol, Merced, CA USA;
6.Cornell Univ, Dept Entomol, Ithaca, NY 14853 USA
推荐引用方式
GB/T 7714
Fonseca-Garcia, Citlali,Coleman-Derr, Devin,Garrido, Etzel,et al. The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity[J]. University of California, Berkeley,2016,7.
APA Fonseca-Garcia, Citlali,Coleman-Derr, Devin,Garrido, Etzel,Visel, Axel,Tringe, Susannah G.,&Partida-Martinez, Laila P..(2016).The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity.FRONTIERS IN MICROBIOLOGY,7.
MLA Fonseca-Garcia, Citlali,et al."The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity".FRONTIERS IN MICROBIOLOGY 7(2016).
条目包含的文件
条目无相关文件。
个性服务
推荐该条目
保存到收藏夹
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Fonseca-Garcia, Citlali]的文章
[Coleman-Derr, Devin]的文章
[Garrido, Etzel]的文章
百度学术
百度学术中相似的文章
[Fonseca-Garcia, Citlali]的文章
[Coleman-Derr, Devin]的文章
[Garrido, Etzel]的文章
必应学术
必应学术中相似的文章
[Fonseca-Garcia, Citlali]的文章
[Coleman-Derr, Devin]的文章
[Garrido, Etzel]的文章
相关权益政策
暂无数据
收藏/分享

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。