干旱区生态环境知识资源中心(Arid): High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India

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DOI	10.1186/1944-3277-10-8
	High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India
	Mukherjee, Supratim 1; Lapidus, Alla 2,3; Shapiro, Nicole 1; Cheng, Jan-Fang 1; Han, James 1; Reddy, T. B. K.1; Huntemann, Marcel 1; Ivanova, Natalia 1; Mikhailova, Natalia 1; Chen, Amy 5; Palaniappan, Krishna 5; Spring, Stefan 4; Goeker, Markus 4; Markowitz, Victor 5; Woyke, Tanja 1; Tindall, Brian J.4; Klenk, Hans-Peter 4; Kyrpides, Nikos C.1,6; Pati, Amrita 1
通讯作者	Pati, Amrita
来源期刊	STANDARDS IN GENOMIC SCIENCES
ISSN	1944-3277
出版年	2015
卷号	10
英文摘要	Pontibacter roseus is a member of genus Pontibacter family Cytophagaceae, class Cytophagia. While the type species of the genus Pontibacter actiniarum was isolated in 2005 from a marine environment, subsequent species of the same genus have been found in different types of habitats ranging from seawater, sediment, desert soil, rhizosphere, contaminated sites, solar saltern and muddy water. Here we describe the features of Pontibacter roseus strain SRC-1(T) along with its complete genome sequence and annotation from a culture of DSM 17521(T). The 4,581,480 bp long draft genome consists of 12 scaffolds with 4,003 protein-coding and 50 RNA genes and is a part of Genomic Encyclopedia of Type Strains: KMG-I project.
英文关键词	Aerobic Gram-negative Non-motile Obligate aerobe Halotolerant Menaquinone GEBA KMG-I
类型	Article
语种	英语
国家	USA ; Russia ; Germany ; Saudi Arabia
收录类别	SCI-E
WOS记录号	WOS:000367976700002
WOS关键词	MENAQUINONE VITAMIN-K-2 BIOSYNTHESIS ; SP-NOV. ; NUCLEOTIDE-SEQUENCE ; EFFLUVIIBACTER-ROSEUS ; O-SUCCINYLBENZOATE ; ESCHERICHIA-COLI ; MULTIDRUG EFFLUX ; GENE ; BACTERIA ; EXPRESSION
WOS类目	Genetics & Heredity ; Microbiology
WOS研究方向	Genetics & Heredity ; Microbiology
来源机构	University of California, Berkeley
资源类型	期刊论文
条目标识符	http://119.78.100.177/qdio/handle/2XILL650/190555
作者单位	1.US DOE, Joint Genome Inst, Walnut Creek, CA USA; 2.St Petersburg State Univ, T Dobzhansky Ctr Genome Bionformat, St Petersburg 199034, Russia; 3.St Petersburg Acad Univ, Algorithm Biol Lab, St Petersburg 199034, Russia; 4.Leibniz Inst DSMZ German Collect Microorganisms &, Braunschweig, Germany; 5.Univ Calif Berkeley, Lawrence Berkeley Natl Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA; 6.King Abdulaziz Univ, Jeddah 21413, Saudi Arabia
推荐引用方式 GB/T 7714	Mukherjee, Supratim,Lapidus, Alla,Shapiro, Nicole,et al. High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India[J]. University of California, Berkeley,2015,10.
APA	Mukherjee, Supratim.,Lapidus, Alla.,Shapiro, Nicole.,Cheng, Jan-Fang.,Han, James.,...&Pati, Amrita.(2015).High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India.STANDARDS IN GENOMIC SCIENCES,10.
MLA	Mukherjee, Supratim,et al."High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India".STANDARDS IN GENOMIC SCIENCES 10(2015).