Arid
DOI10.4137/EBO.S22067
Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress
Ma, Jianchao; Lu, Jing; Xu, Jianmei; Duan, Bingbing; He, Xiaodong; Liu, Jianquan
通讯作者Liu, Jianquan
来源期刊EVOLUTIONARY BIOINFORMATICS
ISSN1176-9343
出版年2015
卷号11页码:47-55
英文摘要

WRKY transcription factors play important roles in plant development and responses to various stresses in plants. However, little is known about the evolution of the WRKY genes in the desert poplar species Populus euphratica, which is highly tolerant of salt stress. In this study, we identified 107 PeWRKY genes from the P. euphratica genome and examined their evolutionary relationships with the WRKY genes of the salt-sensitive congener Populus trichocarpa. Ten PeWRKY genes are specific to P. euphratica, and five of these showed altered expression under salt stress. Furthermore, we found that two pairs of orthologs between the two species showed evidence of positive evolution, with dN/dS ratios >1 (nonsynonymous/synonymous substitutions), and both of them altered their expression in response to salinity stress. These findings suggested that both the development of new genes and positive evolution in some orthologs of the WRKY gene family may have played an important role in the acquisition of high salt tolerance by P. euphratica.


英文关键词WRKY genes expansion Populus euphratica adaptive evolution
类型Article
语种英语
国家Peoples R China
收录类别SCI-E
WOS记录号WOS:000366735800005
WOS关键词MULTIPLE SEQUENCE ALIGNMENT ; TRANSCRIPTION FACTORS ; NEGATIVE REGULATORS ; DNA-BINDING ; DROUGHT TOLERANCE ; SUPERFAMILY ; ARABIDOPSIS ; EXPRESSION ; FAMILY ; NACL
WOS类目Evolutionary Biology ; Mathematical & Computational Biology
WOS研究方向Evolutionary Biology ; Mathematical & Computational Biology
来源机构兰州大学
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/187237
作者单位Lanzhou Univ, Sch Life Sci, State Key Lab Grassland Agroecosyst, Lanzhou 730000, Peoples R China
推荐引用方式
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Ma, Jianchao,Lu, Jing,Xu, Jianmei,et al. Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress[J]. 兰州大学,2015,11:47-55.
APA Ma, Jianchao,Lu, Jing,Xu, Jianmei,Duan, Bingbing,He, Xiaodong,&Liu, Jianquan.(2015).Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress.EVOLUTIONARY BIOINFORMATICS,11,47-55.
MLA Ma, Jianchao,et al."Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress".EVOLUTIONARY BIOINFORMATICS 11(2015):47-55.
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