Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.4137/EBO.S22067 |
Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress | |
Ma, Jianchao; Lu, Jing; Xu, Jianmei; Duan, Bingbing; He, Xiaodong; Liu, Jianquan | |
通讯作者 | Liu, Jianquan |
来源期刊 | EVOLUTIONARY BIOINFORMATICS
![]() |
ISSN | 1176-9343 |
出版年 | 2015 |
卷号 | 11页码:47-55 |
英文摘要 | WRKY transcription factors play important roles in plant development and responses to various stresses in plants. However, little is known about the evolution of the WRKY genes in the desert poplar species Populus euphratica, which is highly tolerant of salt stress. In this study, we identified 107 PeWRKY genes from the P. euphratica genome and examined their evolutionary relationships with the WRKY genes of the salt-sensitive congener Populus trichocarpa. Ten PeWRKY genes are specific to P. euphratica, and five of these showed altered expression under salt stress. Furthermore, we found that two pairs of orthologs between the two species showed evidence of positive evolution, with dN/dS ratios >1 (nonsynonymous/synonymous substitutions), and both of them altered their expression in response to salinity stress. These findings suggested that both the development of new genes and positive evolution in some orthologs of the WRKY gene family may have played an important role in the acquisition of high salt tolerance by P. euphratica. |
英文关键词 | WRKY genes expansion Populus euphratica adaptive evolution |
类型 | Article |
语种 | 英语 |
国家 | Peoples R China |
收录类别 | SCI-E |
WOS记录号 | WOS:000366735800005 |
WOS关键词 | MULTIPLE SEQUENCE ALIGNMENT ; TRANSCRIPTION FACTORS ; NEGATIVE REGULATORS ; DNA-BINDING ; DROUGHT TOLERANCE ; SUPERFAMILY ; ARABIDOPSIS ; EXPRESSION ; FAMILY ; NACL |
WOS类目 | Evolutionary Biology ; Mathematical & Computational Biology |
WOS研究方向 | Evolutionary Biology ; Mathematical & Computational Biology |
来源机构 | 兰州大学 |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/187237 |
作者单位 | Lanzhou Univ, Sch Life Sci, State Key Lab Grassland Agroecosyst, Lanzhou 730000, Peoples R China |
推荐引用方式 GB/T 7714 | Ma, Jianchao,Lu, Jing,Xu, Jianmei,et al. Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress[J]. 兰州大学,2015,11:47-55. |
APA | Ma, Jianchao,Lu, Jing,Xu, Jianmei,Duan, Bingbing,He, Xiaodong,&Liu, Jianquan.(2015).Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress.EVOLUTIONARY BIOINFORMATICS,11,47-55. |
MLA | Ma, Jianchao,et al."Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress".EVOLUTIONARY BIOINFORMATICS 11(2015):47-55. |
条目包含的文件 | 条目无相关文件。 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。