Arid
DOI10.1016/j.ibiod.2013.10.025
Shift in microbial population in response to crystalline cellulose degradation during enrichment with a semi-desert soil
Kumar, Mohit; Khanna, Sunil
通讯作者Kumar, Mohit
来源期刊INTERNATIONAL BIODETERIORATION & BIODEGRADATION
ISSN0964-8305
EISSN1879-0208
出版年2014
卷号88页码:134-141
英文摘要

Addition of crystalline cellulose to semi-desert soil shifts the microbial population; this was assessed by following the 16S rRNA gene, glycosyl hydrolase, and measuring its functional diversity in the bacterial population. Quantification of the glycosyl hydrolase gene showed an increase from 1 x 10(4) g(-1) of unamended soil to 3 x 10(4) g(-1) of crystalline-cellulose-amended soil by the 15th day of crystalline cellulose utilization. The indigenous glycosyl hydrolase community in unamended soil was dominated by the clone families that were closely related to the glycosyl hydrolases from Betaproteobacteria and Firmi-cutes. The addition of crystalline cellulose induced a shift in the glycosyl hydrolase population toward an increase in the relative abundance of the glycosyl hydrolase that was consistent with those of Bacteroidetes and Flavobacteria. The population shift of glycosyl hydrolase was also supported by the comparison of the 16S rRNA gene families in unamended and crystalline-cellulose-amended soil libraries. The most abundant 16S rRNA gene sequences retrieved in the unamended soil were identical to Pseudomonas, Massilia, Paenibacillus, and Bacillus spp., while Cytopliaga and Flavobacterium spp. dominated in crystalline-cellulose-amended soil. (C) 2013 Elsevier Ltd. All rights reserved.


英文关键词Glycosyl hydrolase Crystalline cellulose 16S rRNA Semi-desert soil community
类型Article
语种英语
国家India
收录类别SCI-E
WOS记录号WOS:000331922000019
WOS关键词16S RIBOSOMAL-RNA ; BACTERIA ; PURIFICATION ; SEQUENCES ; GENES ; SUCCESSION ; DIVERSITY
WOS类目Biotechnology & Applied Microbiology ; Environmental Sciences
WOS研究方向Biotechnology & Applied Microbiology ; Environmental Sciences & Ecology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/182642
作者单位NIIT Univ, Neemrana 301705, Rajasthan, India
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Kumar, Mohit,Khanna, Sunil. Shift in microbial population in response to crystalline cellulose degradation during enrichment with a semi-desert soil[J],2014,88:134-141.
APA Kumar, Mohit,&Khanna, Sunil.(2014).Shift in microbial population in response to crystalline cellulose degradation during enrichment with a semi-desert soil.INTERNATIONAL BIODETERIORATION & BIODEGRADATION,88,134-141.
MLA Kumar, Mohit,et al."Shift in microbial population in response to crystalline cellulose degradation during enrichment with a semi-desert soil".INTERNATIONAL BIODETERIORATION & BIODEGRADATION 88(2014):134-141.
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