Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.17129/botsci.93 |
EVALUATING THE PHYLOGENETIC POSITION OF THE MONOTYPIC FAMILY HALOPHYTACEAE (PORTULACINAE, CARYOPHYLLALES) BASED ON PLASTID AND NUCLEAR MOLECULAR DATA SETS | |
Anton, Ana M.1; Hernandez-Hernandez, Tania2; Arturo De-Nova, J.3,4; Sosa, Victoria2 | |
通讯作者 | Sosa, Victoria |
来源期刊 | BOTANICAL SCIENCES
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ISSN | 2007-4298 |
EISSN | 2007-4476 |
出版年 | 2014 |
卷号 | 92期号:3页码:351-361 |
英文摘要 | In spite of numerous phylogenetic studies to determine relationships in Order Caryophyllales and particularly in the suborder Portulacinae, the position of Halophytaceae remains controversial. Halophytum ameghinoi belongs to this monotypic succulent herbaceous family, which is endemic to the Argentine Monte eco-region, in arid and semi-arid scrubland. Some have suggested a relationship with Chenopodiaceae and others a close relationship with Basellaceae and/or Portulacaceae. We performed detailed phylogenetic analyses using the nuclear (18S, ITS, and 26S) and plastid regions (atpB, trnK/matK, ndhF, rbcL, and rpl16) of previous and newly obtained DNA sequences in the suborder Portulacinae to clarify Halophytum’s relationships and to identify the DNA markers with the strongest phylogenetic signal. Phylogenetic analyses performed with the total evidence data matrix confirmed a close relationship between Halophytum and Basellaceae and a close relationship of both with Didiereaceae. The DNA marker with the most parsimony informative sites was the plastid trnK/matK, followed by ndhF. When the proportion of variable to informative sites is considered, the nuclear ITS region retrieved the most informative sites. However, phylogenetic trees retrieved by total evidence analyses improve branch support if this nuclear region is not used. |
英文关键词 | Anredera Basellaceae Halophytum ITS ndhF trnK/matK |
类型 | Article |
语种 | 英语 |
国家 | Argentina ; Mexico |
收录类别 | SCI-E |
WOS记录号 | WOS:000341675600004 |
WOS关键词 | AMEGHINOI HALOPHYTACEAE ; SYSTEMATIC POSITION ; DNA-SEQUENCES ; MATK ; CLASSIFICATION ; PORTULACACEAE ; CHLOROPLAST ; INSIGHTS ; MODELS ; CACTI |
WOS类目 | Plant Sciences |
WOS研究方向 | Plant Sciences |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/181213 |
作者单位 | 1.Univ Nacl Cordoba, CONICET, Inst Multidisciplinario Biol Vegetal, RA-5000 Cordoba, Argentina; 2.Inst Ecol AC, Xalapa, Veracruz, Mexico; 3.Univ Autonoma San Luis Potosi, Inst Invest Zonas Desert, San Luis Potosi, Mexico; 4.Univ Autonoma San Luis Potosi, Fac Agron, San Luis Potosi, Mexico |
推荐引用方式 GB/T 7714 | Anton, Ana M.,Hernandez-Hernandez, Tania,Arturo De-Nova, J.,et al. EVALUATING THE PHYLOGENETIC POSITION OF THE MONOTYPIC FAMILY HALOPHYTACEAE (PORTULACINAE, CARYOPHYLLALES) BASED ON PLASTID AND NUCLEAR MOLECULAR DATA SETS[J],2014,92(3):351-361. |
APA | Anton, Ana M.,Hernandez-Hernandez, Tania,Arturo De-Nova, J.,&Sosa, Victoria.(2014).EVALUATING THE PHYLOGENETIC POSITION OF THE MONOTYPIC FAMILY HALOPHYTACEAE (PORTULACINAE, CARYOPHYLLALES) BASED ON PLASTID AND NUCLEAR MOLECULAR DATA SETS.BOTANICAL SCIENCES,92(3),351-361. |
MLA | Anton, Ana M.,et al."EVALUATING THE PHYLOGENETIC POSITION OF THE MONOTYPIC FAMILY HALOPHYTACEAE (PORTULACINAE, CARYOPHYLLALES) BASED ON PLASTID AND NUCLEAR MOLECULAR DATA SETS".BOTANICAL SCIENCES 92.3(2014):351-361. |
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