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Brazilian late Pleistocene snakes have an extensive fossil record and are recognized for southern, northeastern and northern regions of this country. This fossil record is represented by the families Boidae, ’Colubridae’, Viperidae and Elapidae. Here is presented the first record for Eunectes Wagler for the late Pleistocene of the Brazilian northern region. The material described is a single incomplete dorsal vertebra, and although it shares several vertebral features with most Boidae taxa, it can be distinguished from all other boids because is a robust and wide vertebra with a slightly depressed neural arch, relatively thick and robust zygosphene with a prominent median turbercle. The taxonomic allocation to E. murinus (Linnaeus) is based on the exceptionally large size of the vertebra. The discovery of E. murinus in the late Pleistocene of Tocantins State indicates the presence of a large body of water in a region that has previously been interpreted as relatively arid during this time.