Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1007/s00253-012-4276-9 |
Functional and structural studies of a novel cold-adapted esterase from an Arctic intertidal metagenomic library | |
Fu, Juan1; Leiros, Hanna-Kirsti S.1,2; de Pascale, Donatella3; Johnson, Kenneth A.2; Blencke, Hans-Matti; Landfald, Bjarne1 | |
通讯作者 | Fu, Juan |
来源期刊 | APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
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ISSN | 0175-7598 |
EISSN | 1432-0614 |
出版年 | 2013 |
卷号 | 97期号:9页码:3965-3978 |
英文摘要 | A novel cold-adapted lipolytic enzyme gene, est97, was identified from a high Arctic intertidal zone sediment metagenomic library. The deduced amino acid sequence of Est97 showed low similarity with other lipolytic enzymes, the maximum being 30 % identity with a putative lipase from Vibrio caribbenthicus. Common features of lipolytic enzymes, such as the GXSXG sequence motif, were detected. The gene product was over-expressed in Escherichia coli and purified. The recombinant Est97 (rEst97) hydrolysed various rho-nitrophenyl esters with the best substrate being rho-nitrophenyl hexanoate (K (m) and k (cat) of 39 mu M and 25.8 s(-1), respectively). This esterase activity of rEst97 was optimal at 35 A degrees C and pH 7.5 and the enzyme was unstable at temperatures above 25 A degrees C. The apparent melting temperature, as determined by differential scanning calorimetry was 39 A degrees C, substantiating Est97 as a cold-adapted esterase. The crystal structure of rEst97 was determined by the single wavelength anomalous dispersion method to 1.6 resolution. The protein was found to have a typical alpha/beta-hydrolase fold with Ser144-His226-Asp197 as the catalytic triad. A suggested, relatively short lid domain of rEst97 is composed of residues 80-114, which form an alpha-helix and a disordered loop. The cold adaptation features seem primarily related to a high number of methionine and glycine residues and flexible loops in the high-resolution structures. |
英文关键词 | Esterase Cold adapted Metagenomic Crystal structure Thermolabile |
类型 | Article |
语种 | 英语 |
国家 | Norway ; Italy |
收录类别 | SCI-E |
WOS记录号 | WOS:000317681800019 |
WOS关键词 | HORMONE-SENSITIVE LIPASE ; ANTARCTIC DESERT SOIL ; TIDAL FLAT SEDIMENT ; 16S RDNA ANALYSIS ; SOUTH CHINA SEA ; BACTERIAL LIPASES ; INDUSTRIAL APPLICATIONS ; CANDIDA-ANTARCTICA ; MICROBIAL LIPASES ; CRYSTAL-STRUCTURE |
WOS类目 | Biotechnology & Applied Microbiology |
WOS研究方向 | Biotechnology & Applied Microbiology |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/175782 |
作者单位 | 1.Univ Tromso, Norwegian Coll Fishery Sci, N-9037 Tromso, Norway; 2.Univ Tromso, Dept Chem, Norwegian Struct Biol Ctr NorStruct, N-9037 Tromso, Norway; 3.CNR, Inst Prot Biochem, I-80131 Naples, Italy |
推荐引用方式 GB/T 7714 | Fu, Juan,Leiros, Hanna-Kirsti S.,de Pascale, Donatella,et al. Functional and structural studies of a novel cold-adapted esterase from an Arctic intertidal metagenomic library[J],2013,97(9):3965-3978. |
APA | Fu, Juan,Leiros, Hanna-Kirsti S.,de Pascale, Donatella,Johnson, Kenneth A.,Blencke, Hans-Matti,&Landfald, Bjarne.(2013).Functional and structural studies of a novel cold-adapted esterase from an Arctic intertidal metagenomic library.APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,97(9),3965-3978. |
MLA | Fu, Juan,et al."Functional and structural studies of a novel cold-adapted esterase from an Arctic intertidal metagenomic library".APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 97.9(2013):3965-3978. |
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