Arid
DOI10.1007/s10482-012-9824-x
Geodermatophilus siccatus sp nov., isolated from arid sand of the Saharan desert in Chad
del Carmen Montero-Calasanz, Maria1,2; Goeker, Markus1; Rohde, Manfred3; Schumann, Peter1; Poetter, Gabriele1; Sproeer, Cathrin1; Gorbushina, Anna A.4,5,6; Klenk, Hans-Peter1
通讯作者Klenk, Hans-Peter
来源期刊ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
ISSN0003-6072
EISSN1572-9699
出版年2013
卷号103期号:3页码:449-456
英文摘要

A novel Gram-positive, aerobic, actinobacterial strain, CF6/1(T), was isolated in 2007 during environmental screening of arid desert soil in the Sahara near to Ourba, Chad. The isolate was found to grow best in a temperature range of 20-37 A degrees C and at pH 6.0-8.5 and showed no NaCl tolerance, forming black-coloured and nearly circular colonies on GYM agar. Chemotaxonomic and molecular characteristics determined for the isolate match those previously described for members of the genus Geodermatophilus. The DNA G + C content of the novel strain was determined to be 74.9 mol %. The peptidoglycan was found to contain meso-diaminopimelic acid as the diagnostic diamino acid. The main phospholipids were determined to be phosphatidylethanolamine, phosphatidylinositol, phosphatidylcholine, diphosphatidylglycerol and traces of phosphatidylglycerol; MK-9(H-4) was identified as the dominant menaquinone and galactose as the diagnostic sugar. The major cellular fatty acids were found to be the branched-chain saturated acids iso-C-16:0 and iso-C-15:0, as well as C-17:1 omega 8c. The 16S rRNA gene sequence shows 97.5-97.9 % sequence identity with the four validly named or at least effectively published members of the genus: Geodermatophilus obscurus (97.5 %), Geodermatophilus arenarius (97.7 %), Geodermatophilus ruber (97.9 %) and Geodermatophilus nigrescens (97.9 %). Based on the results from this polyphasic taxonomic analysis and DNA-DNA hybridizations with all type strains of the genus, we propose that strain CF6/1(T) represents a novel species, Geodermatophilus siccatus, with the type strain CF6/1(T) = DSM 45419(T) = CCUG 62765(T) = MTCC 11414(T).


英文关键词Actinomycetes Geodermatophilaceae Taxonomy Xerophiles Phenotype microarray
类型Article
语种英语
国家Germany ; Spain
收录类别SCI-E
WOS记录号WOS:000314763100001
WOS关键词DNA HYBRIDIZATION ; MENAQUINONES ; SEQUENCE ; GENUS
WOS类目Microbiology
WOS研究方向Microbiology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/175739
作者单位1.DSMZ German Collect Microorganisms & Cell Culture, Leibniz Inst, D-38124 Braunschweig, Germany;
2.Ctr Torres Tomejil, IFAPA Inst Invest & Formac Agr & Pesquera, Seville 41200, Spain;
3.HZI Helmholtz Ctr Infect Res, D-38124 Braunschweig, Germany;
4.BAM Fed Inst Mat Res & Testing, D-12205 Berlin, Germany;
5.Free Univ Berlin, Dept Biol Chem & Pharm, D-12249 Berlin, Germany;
6.Free Univ Berlin, Dept Earth Sci, D-12249 Berlin, Germany
推荐引用方式
GB/T 7714
del Carmen Montero-Calasanz, Maria,Goeker, Markus,Rohde, Manfred,et al. Geodermatophilus siccatus sp nov., isolated from arid sand of the Saharan desert in Chad[J],2013,103(3):449-456.
APA del Carmen Montero-Calasanz, Maria.,Goeker, Markus.,Rohde, Manfred.,Schumann, Peter.,Poetter, Gabriele.,...&Klenk, Hans-Peter.(2013).Geodermatophilus siccatus sp nov., isolated from arid sand of the Saharan desert in Chad.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,103(3),449-456.
MLA del Carmen Montero-Calasanz, Maria,et al."Geodermatophilus siccatus sp nov., isolated from arid sand of the Saharan desert in Chad".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 103.3(2013):449-456.
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