Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1007/s10482-012-9812-1 |
Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America | |
Reddy, Gundlapally S. N.; Garcia-Pichel, Ferran | |
通讯作者 | Reddy, Gundlapally S. N. |
来源期刊 | ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
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ISSN | 0003-6072 |
EISSN | 1572-9699 |
出版年 | 2013 |
卷号 | 103期号:2页码:321-330 |
英文摘要 | Strain OR362-8(T) was isolated from a biological soil crust sample collected from the southwestern arid lands of the United States of America, using BG11-PGY medium. Cells of OR362-8(T) were found to be rod shaped; occur singly, as pairs and in groups; non-motile; positive for catalase, oxidase, phosphatase and gelatinase; hydrolyze starch; contain iso-C-15:0, anteiso-C-15:0, iso-C(15:1)G, C-16:1 omega 5c and summed feature 3 (C-16:1(omega 7c)/iso-C-15:0 2OH as defined by the MIDI system) as the major fatty acids; and MK-7 as the sole respiratory quinone. A BLAST sequence similarity search using 16S rRNA gene sequence of OR362-8(T) identified Hymenobacter as the nearest genus with a similarity of 90.4-96.9 %. The phylogenetic analyses based on the phenetic methods UPGMA, NJ, ME and DNA parsimony resulted in the clustering of OR362-8(T) with Clade 1 Hymenobacter species represented by Hymenobacter glaciei, Hymenobacter antarcticus, Hymenobacter flocculans, Hymenobacter metalli and Hymenobacter soli with the closest being the Hymenobacter glaciei (96.9 % 16S rRNA gene sequence similarity). Besides the strong phylogentic affiliation, OR362-8(T) also exhibited significant phenotypic and chemotaxonomic differences with the members of Clade 1 Hymenobacter spp. More importantly, the DNA G+C content (mol%) of OR362-8(T) is very high (70 %) compared to the nearest species identified by phylogenetic analysis. Based on the phylogenetic, phenotypic and chemotaxonomic characteristics, OR362-8(T) was assigned to a novel species for which we propose here the name Hymenobacter arizonensis sp. nov., with OR362-8(T) (=ATCC BAA 1266(T) = DSM 17860(T) = JCM 13504(T)) as the type strain. |
英文关键词 | Hymenobacter arizonensis Biological soil crusts 16S rRNA gene sequence BG11-PGY medium |
类型 | Article |
语种 | 英语 |
国家 | USA |
收录类别 | SCI-E |
WOS记录号 | WOS:000313653400006 |
WOS关键词 | BIOLOGICAL SOIL CRUSTS ; RADIATION-RESISTANT BACTERIUM ; COLORADO PLATEAU ; EMENDED DESCRIPTION ; DEOXYRIBONUCLEIC-ACID ; HIGH-ALTITUDE ; GEN. NOV. ; DESERT ; DIVERSITY ; PROPOSAL |
WOS类目 | Microbiology |
WOS研究方向 | Microbiology |
来源机构 | Arizona State University |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/175737 |
作者单位 | Arizona State Univ, Sch Life Sci, Tempe, AZ 85287 USA |
推荐引用方式 GB/T 7714 | Reddy, Gundlapally S. N.,Garcia-Pichel, Ferran. Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America[J]. Arizona State University,2013,103(2):321-330. |
APA | Reddy, Gundlapally S. N.,&Garcia-Pichel, Ferran.(2013).Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,103(2),321-330. |
MLA | Reddy, Gundlapally S. N.,et al."Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 103.2(2013):321-330. |
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