Arid
DOI10.1007/s10482-012-9812-1
Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America
Reddy, Gundlapally S. N.; Garcia-Pichel, Ferran
通讯作者Reddy, Gundlapally S. N.
来源期刊ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
ISSN0003-6072
EISSN1572-9699
出版年2013
卷号103期号:2页码:321-330
英文摘要

Strain OR362-8(T) was isolated from a biological soil crust sample collected from the southwestern arid lands of the United States of America, using BG11-PGY medium. Cells of OR362-8(T) were found to be rod shaped; occur singly, as pairs and in groups; non-motile; positive for catalase, oxidase, phosphatase and gelatinase; hydrolyze starch; contain iso-C-15:0, anteiso-C-15:0, iso-C(15:1)G, C-16:1 omega 5c and summed feature 3 (C-16:1(omega 7c)/iso-C-15:0 2OH as defined by the MIDI system) as the major fatty acids; and MK-7 as the sole respiratory quinone. A BLAST sequence similarity search using 16S rRNA gene sequence of OR362-8(T) identified Hymenobacter as the nearest genus with a similarity of 90.4-96.9 %. The phylogenetic analyses based on the phenetic methods UPGMA, NJ, ME and DNA parsimony resulted in the clustering of OR362-8(T) with Clade 1 Hymenobacter species represented by Hymenobacter glaciei, Hymenobacter antarcticus, Hymenobacter flocculans, Hymenobacter metalli and Hymenobacter soli with the closest being the Hymenobacter glaciei (96.9 % 16S rRNA gene sequence similarity). Besides the strong phylogentic affiliation, OR362-8(T) also exhibited significant phenotypic and chemotaxonomic differences with the members of Clade 1 Hymenobacter spp. More importantly, the DNA G+C content (mol%) of OR362-8(T) is very high (70 %) compared to the nearest species identified by phylogenetic analysis. Based on the phylogenetic, phenotypic and chemotaxonomic characteristics, OR362-8(T) was assigned to a novel species for which we propose here the name Hymenobacter arizonensis sp. nov., with OR362-8(T) (=ATCC BAA 1266(T) = DSM 17860(T) = JCM 13504(T)) as the type strain.


英文关键词Hymenobacter arizonensis Biological soil crusts 16S rRNA gene sequence BG11-PGY medium
类型Article
语种英语
国家USA
收录类别SCI-E
WOS记录号WOS:000313653400006
WOS关键词BIOLOGICAL SOIL CRUSTS ; RADIATION-RESISTANT BACTERIUM ; COLORADO PLATEAU ; EMENDED DESCRIPTION ; DEOXYRIBONUCLEIC-ACID ; HIGH-ALTITUDE ; GEN. NOV. ; DESERT ; DIVERSITY ; PROPOSAL
WOS类目Microbiology
WOS研究方向Microbiology
来源机构Arizona State University
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/175737
作者单位Arizona State Univ, Sch Life Sci, Tempe, AZ 85287 USA
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Reddy, Gundlapally S. N.,Garcia-Pichel, Ferran. Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America[J]. Arizona State University,2013,103(2):321-330.
APA Reddy, Gundlapally S. N.,&Garcia-Pichel, Ferran.(2013).Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,103(2),321-330.
MLA Reddy, Gundlapally S. N.,et al."Description of Hymenobacter arizonensis sp nov from the southwestern arid lands of the United States of America".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 103.2(2013):321-330.
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