Arid
DOI10.1017/S0954102012000831
Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats
Nakai, Ryosuke1,2; Shibuya, Eri1; Justel, Ana3; Rico, Eugenio4; Quesada, Antonio5; Kobayashi, Fumihisa6; Iwasaka, Yasunobu6; Shi, Guang-Yu7; Amano, Yuki8,9; Iwatsuki, Teruki8,9; Naganuma, Takeshi1
通讯作者Naganuma, Takeshi
来源期刊ANTARCTIC SCIENCE
ISSN0954-1020
出版年2013
卷号25期号:2页码:219-228
英文摘要

Although the lower size limit of microorganisms was previously believed to be c. 0.2 mm, there is evidence for the existence of microorganisms that can pass through 0.2 mm-pore-size filters called ultramicrobacteria or nanobacteria. However, information on the phylogeny and biogeography of these bacteria is limited. We obtained 53 isolates of 0.2 mm-passable bacteria from 31 samples collected at 26 locations worldwide, including the Arctic Svalbard Islands, deserts, and Maritime Antarctica. Phylogenetic analysis of near full-length 16S rRNA gene sequences revealed that 18 of the 53 isolates were <97% homologous with previously cultured isolates, representing potentially novel species. Two isolates (order Rhizobiales) (100% identical) collected from Byers Peninsula, Livingston Island in Maritime Antarctica, were closely related (99.8% similarity) to an isolate collected from intertidal sediments in East Antarctica. In addition, the sequence of this Antarctic isolate showed >= 97% similarity to 901 sequences derived from known isolates and samples collected at geographically disparate locations under various environmental conditions. Interestingly, among 13 sequences showing >= 99% similarity, ten were isolated from cryospheric habitats such as Arctic, Antarctic, and alpine environments. This implies that such Rhizobiales strains occur in the cryospheric regions, however, their abundance and biomass may be scarce depending on the geographic location.


英文关键词16S rRNA gene Antarctica Baas-Becking hypothesis biodiversity biogeography ultramicrobacteria
类型Article
语种英语
国家Japan ; Spain ; Peoples R China
收录类别SCI-E
WOS记录号WOS:000316479700010
WOS关键词FRESH-WATER HABITATS ; GULF-COAST ESTUARY ; POLYNUCLEOBACTER-NECESSARIUS ; HETEROTROPHIC BACTERIA ; MICROORGANISMS ; DIVERSITY ; ULTRAMICROBACTERIA ; SEAWATER
WOS类目Environmental Sciences ; Geography, Physical ; Geosciences, Multidisciplinary
WOS研究方向Environmental Sciences & Ecology ; Physical Geography ; Geology
来源机构中国科学院大气物理研究所
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/175730
作者单位1.Hiroshima Univ, Grad Sch Biosphere Sci, Higashihiroshima, Hiroshima 7398528, Japan;
2.Japan Soc Promot Sci, Chiyoda Ku, Tokyo 1028471, Japan;
3.Univ Autonoma Madrid, Dept Matemat, E-28049 Madrid, Spain;
4.Univ Autonoma Madrid, Dept Ecol, E-28049 Madrid, Spain;
5.Univ Autonoma Madrid, Dept Biol, E-28049 Madrid, Spain;
6.Kanazawa Univ, Inst Nat & Environm Technol, Kanazawa, Ishikawa 9201192, Japan;
7.Chinese Acad Sci, Inst Atmospher Phys, Beijing 100029, Peoples R China;
8.Japan Atom Energy Agcy, Mizunami Underground Res Lab, Mizunami, Gifu 5096132, Japan;
9.Japan Atom Energy Agcy, Horonobe Underground Res Ctr, Horonobe, Hokkaido 0983224, Japan
推荐引用方式
GB/T 7714
Nakai, Ryosuke,Shibuya, Eri,Justel, Ana,et al. Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats[J]. 中国科学院大气物理研究所,2013,25(2):219-228.
APA Nakai, Ryosuke.,Shibuya, Eri.,Justel, Ana.,Rico, Eugenio.,Quesada, Antonio.,...&Naganuma, Takeshi.(2013).Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats.ANTARCTIC SCIENCE,25(2),219-228.
MLA Nakai, Ryosuke,et al."Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats".ANTARCTIC SCIENCE 25.2(2013):219-228.
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