Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1017/S0954102012000831 |
Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats | |
Nakai, Ryosuke1,2; Shibuya, Eri1; Justel, Ana3; Rico, Eugenio4; Quesada, Antonio5; Kobayashi, Fumihisa6; Iwasaka, Yasunobu6; Shi, Guang-Yu7; Amano, Yuki8,9; Iwatsuki, Teruki8,9; Naganuma, Takeshi1 | |
通讯作者 | Naganuma, Takeshi |
来源期刊 | ANTARCTIC SCIENCE
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ISSN | 0954-1020 |
出版年 | 2013 |
卷号 | 25期号:2页码:219-228 |
英文摘要 | Although the lower size limit of microorganisms was previously believed to be c. 0.2 mm, there is evidence for the existence of microorganisms that can pass through 0.2 mm-pore-size filters called ultramicrobacteria or nanobacteria. However, information on the phylogeny and biogeography of these bacteria is limited. We obtained 53 isolates of 0.2 mm-passable bacteria from 31 samples collected at 26 locations worldwide, including the Arctic Svalbard Islands, deserts, and Maritime Antarctica. Phylogenetic analysis of near full-length 16S rRNA gene sequences revealed that 18 of the 53 isolates were <97% homologous with previously cultured isolates, representing potentially novel species. Two isolates (order Rhizobiales) (100% identical) collected from Byers Peninsula, Livingston Island in Maritime Antarctica, were closely related (99.8% similarity) to an isolate collected from intertidal sediments in East Antarctica. In addition, the sequence of this Antarctic isolate showed >= 97% similarity to 901 sequences derived from known isolates and samples collected at geographically disparate locations under various environmental conditions. Interestingly, among 13 sequences showing >= 99% similarity, ten were isolated from cryospheric habitats such as Arctic, Antarctic, and alpine environments. This implies that such Rhizobiales strains occur in the cryospheric regions, however, their abundance and biomass may be scarce depending on the geographic location. |
英文关键词 | 16S rRNA gene Antarctica Baas-Becking hypothesis biodiversity biogeography ultramicrobacteria |
类型 | Article |
语种 | 英语 |
国家 | Japan ; Spain ; Peoples R China |
收录类别 | SCI-E |
WOS记录号 | WOS:000316479700010 |
WOS关键词 | FRESH-WATER HABITATS ; GULF-COAST ESTUARY ; POLYNUCLEOBACTER-NECESSARIUS ; HETEROTROPHIC BACTERIA ; MICROORGANISMS ; DIVERSITY ; ULTRAMICROBACTERIA ; SEAWATER |
WOS类目 | Environmental Sciences ; Geography, Physical ; Geosciences, Multidisciplinary |
WOS研究方向 | Environmental Sciences & Ecology ; Physical Geography ; Geology |
来源机构 | 中国科学院大气物理研究所 |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/175730 |
作者单位 | 1.Hiroshima Univ, Grad Sch Biosphere Sci, Higashihiroshima, Hiroshima 7398528, Japan; 2.Japan Soc Promot Sci, Chiyoda Ku, Tokyo 1028471, Japan; 3.Univ Autonoma Madrid, Dept Matemat, E-28049 Madrid, Spain; 4.Univ Autonoma Madrid, Dept Ecol, E-28049 Madrid, Spain; 5.Univ Autonoma Madrid, Dept Biol, E-28049 Madrid, Spain; 6.Kanazawa Univ, Inst Nat & Environm Technol, Kanazawa, Ishikawa 9201192, Japan; 7.Chinese Acad Sci, Inst Atmospher Phys, Beijing 100029, Peoples R China; 8.Japan Atom Energy Agcy, Mizunami Underground Res Lab, Mizunami, Gifu 5096132, Japan; 9.Japan Atom Energy Agcy, Horonobe Underground Res Ctr, Horonobe, Hokkaido 0983224, Japan |
推荐引用方式 GB/T 7714 | Nakai, Ryosuke,Shibuya, Eri,Justel, Ana,et al. Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats[J]. 中国科学院大气物理研究所,2013,25(2):219-228. |
APA | Nakai, Ryosuke.,Shibuya, Eri.,Justel, Ana.,Rico, Eugenio.,Quesada, Antonio.,...&Naganuma, Takeshi.(2013).Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats.ANTARCTIC SCIENCE,25(2),219-228. |
MLA | Nakai, Ryosuke,et al."Phylogeographic analysis of filterable bacteria with special reference to Rhizobiales strains that occur in cryospheric habitats".ANTARCTIC SCIENCE 25.2(2013):219-228. |
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