Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1007/s11032-011-9660-0 |
Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.) | |
Gautami, B.2,3; Pandey, M. K.2; Vadez, V.2; Nigam, S. N.2; Ratnakumar, P.2; Krishnamurthy, L.2; Radhakrishnan, T.6; Gowda, M. V. C.4; Narasu, M. L.3; Hoisington, D. A.2; Knapp, S. J.5; Varshney, R. K.1,2 | |
通讯作者 | Varshney, R. K. |
来源期刊 | MOLECULAR BREEDING
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ISSN | 1380-3743 |
EISSN | 1572-9788 |
出版年 | 2012 |
卷号 | 30期号:2页码:757-772 |
英文摘要 | Groundnut (Arachis hypogaea L.) is an important food and cash crop grown mainly in semi-arid tropics (SAT) regions of the world where drought is the major constraint on productivity. With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 x CSMG 84-1 (RIL-2) and ICGS 44 x ICGS 76 (RIL-3), were used. After screening of 3,215 simple sequence repeat (SSR) markers on the parental genotypes of these populations, two new genetic maps were developed with 119 (RIL-2) and 82 (RIL-3) SSR loci. Together with these maps and the reference map with 191 SSR loci based on TAG 24 x ICGV 86031 (RIL-1), a consensus map was constructed with 293 SSR loci distributed over 20 linkage groups, spanning 2,840.8 cM. As all these three populations segregate for drought-tolerance-related traits, a comprehensive QTL analysis identified 153 main effect QTL (M-QTL) and 25 epistatic QTL (E-QTL) for drought-tolerance-related traits. Localization of these QTL on the consensus map provided 16 genomic regions that contained 125 QTL. A few key genomic regions were selected on the basis of the QTL identified in each region, and their expected role in drought adaptation is also discussed. Given that no major QTL for drought adaptation were identified, novel breeding approaches such as marker-assisted recurrent selection (MARS) and genomic selection (GS) approaches are likely to be the preferred approaches for introgression of a larger number of QTL in order to breed drought-tolerant groundnut genotypes. |
英文关键词 | Peanut Drought tolerance Consensus map QTL analysis Main-effect QTL Epistatic QTL Molecular breeding |
类型 | Article |
语种 | 英语 |
国家 | Mexico ; India ; USA |
收录类别 | SCI-E |
WOS记录号 | WOS:000307270900012 |
WOS关键词 | CARBON-ISOTOPE DISCRIMINATION ; MARKER-ASSISTED SELECTION ; WATER-USE EFFICIENCY ; MOLECULAR MARKERS ; YIELD COMPONENTS ; TROPICAL MAIZE ; LINKAGE MAP ; IDENTIFICATION ; SSR ; TRANSPIRATION |
WOS类目 | Agronomy ; Plant Sciences ; Genetics & Heredity ; Horticulture |
WOS研究方向 | Agriculture ; Plant Sciences ; Genetics & Heredity |
来源机构 | International Crops Research Institute for the Semi-Arid Tropics |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/174078 |
作者单位 | 1.CIMMYT, CGIAR Generat Challenge Programme GCP, Mexico City 06600, DF, Mexico; 2.Int Crops Res Inst Semi Arid Trop, Patancheru 502324, Andhra Pradesh, India; 3.JNTUH, Inst Sci & Technol, Greater Hyderabad 500085, India; 4.Univ Agr Sci, Dharwad 580005, Karnataka, India; 5.Univ Georgia, Athens, GA 30602 USA; 6.DGR, Junagadh 362001, Gujarat, India |
推荐引用方式 GB/T 7714 | Gautami, B.,Pandey, M. K.,Vadez, V.,et al. Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.)[J]. International Crops Research Institute for the Semi-Arid Tropics,2012,30(2):757-772. |
APA | Gautami, B..,Pandey, M. K..,Vadez, V..,Nigam, S. N..,Ratnakumar, P..,...&Varshney, R. K..(2012).Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.).MOLECULAR BREEDING,30(2),757-772. |
MLA | Gautami, B.,et al."Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.)".MOLECULAR BREEDING 30.2(2012):757-772. |
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