Arid
DOI10.1007/s11032-011-9660-0
Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.)
Gautami, B.2,3; Pandey, M. K.2; Vadez, V.2; Nigam, S. N.2; Ratnakumar, P.2; Krishnamurthy, L.2; Radhakrishnan, T.6; Gowda, M. V. C.4; Narasu, M. L.3; Hoisington, D. A.2; Knapp, S. J.5; Varshney, R. K.1,2
通讯作者Varshney, R. K.
来源期刊MOLECULAR BREEDING
ISSN1380-3743
EISSN1572-9788
出版年2012
卷号30期号:2页码:757-772
英文摘要

Groundnut (Arachis hypogaea L.) is an important food and cash crop grown mainly in semi-arid tropics (SAT) regions of the world where drought is the major constraint on productivity. With the aim of understanding the genetic basis and identification of quantitative trait loci (QTL) for drought tolerance, two new recombinant inbred line (RIL) mapping populations, namely ICGS 76 x CSMG 84-1 (RIL-2) and ICGS 44 x ICGS 76 (RIL-3), were used. After screening of 3,215 simple sequence repeat (SSR) markers on the parental genotypes of these populations, two new genetic maps were developed with 119 (RIL-2) and 82 (RIL-3) SSR loci. Together with these maps and the reference map with 191 SSR loci based on TAG 24 x ICGV 86031 (RIL-1), a consensus map was constructed with 293 SSR loci distributed over 20 linkage groups, spanning 2,840.8 cM. As all these three populations segregate for drought-tolerance-related traits, a comprehensive QTL analysis identified 153 main effect QTL (M-QTL) and 25 epistatic QTL (E-QTL) for drought-tolerance-related traits. Localization of these QTL on the consensus map provided 16 genomic regions that contained 125 QTL. A few key genomic regions were selected on the basis of the QTL identified in each region, and their expected role in drought adaptation is also discussed. Given that no major QTL for drought adaptation were identified, novel breeding approaches such as marker-assisted recurrent selection (MARS) and genomic selection (GS) approaches are likely to be the preferred approaches for introgression of a larger number of QTL in order to breed drought-tolerant groundnut genotypes.


英文关键词Peanut Drought tolerance Consensus map QTL analysis Main-effect QTL Epistatic QTL Molecular breeding
类型Article
语种英语
国家Mexico ; India ; USA
收录类别SCI-E
WOS记录号WOS:000307270900012
WOS关键词CARBON-ISOTOPE DISCRIMINATION ; MARKER-ASSISTED SELECTION ; WATER-USE EFFICIENCY ; MOLECULAR MARKERS ; YIELD COMPONENTS ; TROPICAL MAIZE ; LINKAGE MAP ; IDENTIFICATION ; SSR ; TRANSPIRATION
WOS类目Agronomy ; Plant Sciences ; Genetics & Heredity ; Horticulture
WOS研究方向Agriculture ; Plant Sciences ; Genetics & Heredity
来源机构International Crops Research Institute for the Semi-Arid Tropics
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/174078
作者单位1.CIMMYT, CGIAR Generat Challenge Programme GCP, Mexico City 06600, DF, Mexico;
2.Int Crops Res Inst Semi Arid Trop, Patancheru 502324, Andhra Pradesh, India;
3.JNTUH, Inst Sci & Technol, Greater Hyderabad 500085, India;
4.Univ Agr Sci, Dharwad 580005, Karnataka, India;
5.Univ Georgia, Athens, GA 30602 USA;
6.DGR, Junagadh 362001, Gujarat, India
推荐引用方式
GB/T 7714
Gautami, B.,Pandey, M. K.,Vadez, V.,et al. Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.)[J]. International Crops Research Institute for the Semi-Arid Tropics,2012,30(2):757-772.
APA Gautami, B..,Pandey, M. K..,Vadez, V..,Nigam, S. N..,Ratnakumar, P..,...&Varshney, R. K..(2012).Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.).MOLECULAR BREEDING,30(2),757-772.
MLA Gautami, B.,et al."Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.)".MOLECULAR BREEDING 30.2(2012):757-772.
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