Arid
Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing
Zhang, Zhengyi1; Peng, Zhi-Yu2; Yi, Kang2; Cheng, Yanbing2; Xia, Yuxian1
通讯作者Xia, Yuxian
来源期刊JOURNAL OF INSECT SCIENCE
ISSN1536-2442
出版年2012
卷号12
英文摘要

The shortage of available genomic and transcriptomic data hampers the molecular study on the migratory locust, Locusta migratoria manilensis (L.) (Orthoptera: Acrididae) central nervous system (CNS). In this study, locust CNS RNA was sequenced by deep sequencing. 41,179 unigenes were obtained with an average length of 570 bp, and 5,519 unigenes were longer than 1,000 bp. Compared with an EST database of another locust species Schistocerca gregaria Forsskai, 9,069 unigenes were found conserved, while 32,110 unigenes were differentially expressed. A total of 15,895 unigenes were identified, including 644 nervous system relevant unigenes. Among the 25,284 unknown unigenes, 9,482 were found to be specific to the CNS by filtering out the previous ESTs acquired from locust organs without CNS’s. The locust CNS showed the most matches (18%) with Tribolium castaneum (Herbst) (Coleoptera: Tenebrionidae) sequences. Comprehensive assessment reveals that the database generated in this study is broadly representative of the CNS of adult locust, providing comprehensive gene information at the transcriptional level that could facilitate research of the locust CNS, including various physiological aspects and pesticide target finding.


英文关键词database transcriptome unigene
类型Article
语种英语
国家Peoples R China
收录类别SCI-E
WOS记录号WOS:000306948400001
WOS关键词NICOTINIC ACETYLCHOLINE-RECEPTOR ; CAENORHABDITIS-ELEGANS ; SCHISTOCERCA-GREGARIA ; NEURAL CLADISTICS ; SODIUM-CHANNELS ; DESERT LOCUST ; ION CHANNELS ; INSECTICIDES ; DROSOPHILA ; RNAI
WOS类目Entomology
WOS研究方向Entomology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/173722
作者单位1.Chongqing Univ, Chongqing Engn Res Ctr Fungal Insecticide, Genet Engn Res Ctr, Sch Bioengn,Key Lab Gene Funct & Express Regulat, Chongqing 400030, Peoples R China;
2.Beijing Genom Inst Shenzhen, Shenzhen 518083, Peoples R China
推荐引用方式
GB/T 7714
Zhang, Zhengyi,Peng, Zhi-Yu,Yi, Kang,et al. Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing[J],2012,12.
APA Zhang, Zhengyi,Peng, Zhi-Yu,Yi, Kang,Cheng, Yanbing,&Xia, Yuxian.(2012).Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing.JOURNAL OF INSECT SCIENCE,12.
MLA Zhang, Zhengyi,et al."Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing".JOURNAL OF INSECT SCIENCE 12(2012).
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