Knowledge Resource Center for Ecological Environment in Arid Area
Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing | |
Zhang, Zhengyi1; Peng, Zhi-Yu2; Yi, Kang2; Cheng, Yanbing2; Xia, Yuxian1 | |
通讯作者 | Xia, Yuxian |
来源期刊 | JOURNAL OF INSECT SCIENCE
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ISSN | 1536-2442 |
出版年 | 2012 |
卷号 | 12 |
英文摘要 | The shortage of available genomic and transcriptomic data hampers the molecular study on the migratory locust, Locusta migratoria manilensis (L.) (Orthoptera: Acrididae) central nervous system (CNS). In this study, locust CNS RNA was sequenced by deep sequencing. 41,179 unigenes were obtained with an average length of 570 bp, and 5,519 unigenes were longer than 1,000 bp. Compared with an EST database of another locust species Schistocerca gregaria Forsskai, 9,069 unigenes were found conserved, while 32,110 unigenes were differentially expressed. A total of 15,895 unigenes were identified, including 644 nervous system relevant unigenes. Among the 25,284 unknown unigenes, 9,482 were found to be specific to the CNS by filtering out the previous ESTs acquired from locust organs without CNS’s. The locust CNS showed the most matches (18%) with Tribolium castaneum (Herbst) (Coleoptera: Tenebrionidae) sequences. Comprehensive assessment reveals that the database generated in this study is broadly representative of the CNS of adult locust, providing comprehensive gene information at the transcriptional level that could facilitate research of the locust CNS, including various physiological aspects and pesticide target finding. |
英文关键词 | database transcriptome unigene |
类型 | Article |
语种 | 英语 |
国家 | Peoples R China |
收录类别 | SCI-E |
WOS记录号 | WOS:000306948400001 |
WOS关键词 | NICOTINIC ACETYLCHOLINE-RECEPTOR ; CAENORHABDITIS-ELEGANS ; SCHISTOCERCA-GREGARIA ; NEURAL CLADISTICS ; SODIUM-CHANNELS ; DESERT LOCUST ; ION CHANNELS ; INSECTICIDES ; DROSOPHILA ; RNAI |
WOS类目 | Entomology |
WOS研究方向 | Entomology |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/173722 |
作者单位 | 1.Chongqing Univ, Chongqing Engn Res Ctr Fungal Insecticide, Genet Engn Res Ctr, Sch Bioengn,Key Lab Gene Funct & Express Regulat, Chongqing 400030, Peoples R China; 2.Beijing Genom Inst Shenzhen, Shenzhen 518083, Peoples R China |
推荐引用方式 GB/T 7714 | Zhang, Zhengyi,Peng, Zhi-Yu,Yi, Kang,et al. Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing[J],2012,12. |
APA | Zhang, Zhengyi,Peng, Zhi-Yu,Yi, Kang,Cheng, Yanbing,&Xia, Yuxian.(2012).Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing.JOURNAL OF INSECT SCIENCE,12. |
MLA | Zhang, Zhengyi,et al."Identification of representative genes of the central nervous system of the locust, Locusta migratoria manilensis by deep sequencing".JOURNAL OF INSECT SCIENCE 12(2012). |
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