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Major ions and stable isotopes in groundwaters of the Plio-Quaternary shallow aquifer of the Djerid oases, southern Tunisia, were investigated to elucidate the origin of groundwater recharge and the mineralization processes. It has been demonstrated that the groundwater composition is mainly controlled by the water-rock interaction, the encroachment of brines from the Chotts and the return flow of irrigation waters. The isotopically depleted groundwater samples suggest that the recharge waters derive from an old palaeoclimatic origin. However, the enriched groundwater samples reflect the presence of evaporated recharge water. Furthermore, the large negative deuterium-excess values indicate the effect of secondary evaporation processes, probably related to the return flow of irrigation waters pumped from the underlying aquifer.