Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.4238/2011.October.31.3 |
Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals | |
Arif, I. A.1,2; Khan, H. A.1,2; Al Sadoon, M.2; Shobrak, M.2,3 | |
通讯作者 | Khan, H. A. |
来源期刊 | GENETICS AND MOLECULAR RESEARCH
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ISSN | 1676-5680 |
出版年 | 2011 |
卷号 | 10期号:4页码:3559-3564 |
英文摘要 | In recent years, DNA barcoding has emerged as a powerful tool for species identification. We report an extended validation of a universal DNA mini-barcode for amplification of 130-bp COI segments from 23 specimens collected from a desert environment, including 11 reptiles, five mammals and seven birds. Besides the standard double-annealing protocol, we also tested a more stringent single-annealing protocol. The PCR success rate for the amplification of the mini-barcode region was: mammals (4/5), reptiles (5/11) and birds (4/7). These findings demonstrate the limited utility of universal primers for mini-barcoding, at least for these vertebrate taxa that we collected from the Saudi Arabian desert. |
英文关键词 | Mini-barcode Cytochrome oxidase 1 Reptiles Mammals Birds PCR Barcoding Amplification success |
类型 | Article |
语种 | 英语 |
国家 | Saudi Arabia |
收录类别 | SCI-E |
WOS记录号 | WOS:000300617600130 |
WOS关键词 | SPECIES IDENTIFICATION |
WOS类目 | Biochemistry & Molecular Biology ; Genetics & Heredity |
WOS研究方向 | Biochemistry & Molecular Biology ; Genetics & Heredity |
来源机构 | King Saud University |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/168194 |
作者单位 | 1.King Saud Univ, Coll Sci, Dept Biochem, Analyt & Mol Biosci Res Grp, Riyadh 11451, Saudi Arabia; 2.King Saud Univ, Mol Fingerprinting & Biodivers Unit, Prince Sultan Res Chair Environm & Wildlife, Dept Bot & Microbiol,Coll Sci, Riyadh 11451, Saudi Arabia; 3.Taif Univ, Coll Sci, Dept Biol, At Taif, Saudi Arabia |
推荐引用方式 GB/T 7714 | Arif, I. A.,Khan, H. A.,Al Sadoon, M.,et al. Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals[J]. King Saud University,2011,10(4):3559-3564. |
APA | Arif, I. A.,Khan, H. A.,Al Sadoon, M.,&Shobrak, M..(2011).Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals.GENETICS AND MOLECULAR RESEARCH,10(4),3559-3564. |
MLA | Arif, I. A.,et al."Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals".GENETICS AND MOLECULAR RESEARCH 10.4(2011):3559-3564. |
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