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Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor | |
Castillo-Garit, Juan A.1,2,3,4; Garcia-Domenech, Ramon1; Marrero-Ponce, Yovani4; Torrens, Francisco5; Abad, Concepcion2 | |
通讯作者 | Castillo-Garit, Juan A. |
来源期刊 | AFINIDAD
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ISSN | 0001-9704 |
出版年 | 2011 |
卷号 | 68期号:555页码:334-340 |
英文摘要 | The non-stochastic and stochastic atom-based three dimensional (3D)-chiral quadratic indices are applied to predict the binding affinities of 26 stereoisomers of fenoterol with the beta(2)-adrenoceptor (beta(2)-AR). The prediction of beta(2)-AR binding affinities of the stereoisomers is carried out by multiple linear regression analysis. Two statistically significant QSAR models are obtained when non-stochastic (R-2 = 0.941 and s = 0.19) and stochastic (R-2 = 0.947 and s = 0.18) 3D-chiral quadratic indices are used. These models show adequate predictive power (assessed by the leave-one-out cross-validation experiment), yielding values of q(2) = 0.909 (s(cv) = 0.219) and q(2) = 0.917 (s(cv) = 0.208), respectively. These models compare favorably with a 3D-QSAR equation obtained with the CoMFA method (R-2 = 0.920, q(2) = 0.847 and s(cv) = 0.309). The results of our work demonstrate the usefulness of our topological approach for the prediction of biological activity, even in those studies in which the three-dimensional configuration of the chemicals play an important role in the bioactivity. |
英文关键词 | non-stochastic and stochastic atom-based 3D-chiral quadratic indices beta(2)-adrenoceptor binding affinity fenoterol stereoisomer 3D-QSAR |
类型 | Article |
语种 | 英语 |
国家 | Spain ; Cuba |
收录类别 | SCI-E |
WOS记录号 | WOS:000303079600002 |
WOS关键词 | CENTRAL CHIRALITY CODIFICATION ; MOLECULAR LINEAR INDEXES ; BETA(2)-ADRENERGIC RECEPTOR ; TOPOLOGICAL APPROACH ; DRUG DISCOVERY ; TOMOCOMD-CARDD ; OASIS METHOD ; DESIGN ; IDENTIFICATION |
WOS类目 | Chemistry, Multidisciplinary |
WOS研究方向 | Chemistry |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/166805 |
作者单位 | 1.Univ Valencia, Fac Farm, Dept Quim Fis, Unidad Invest Diseno Farmacos & Conectividad Mol, E-46010 Valencia, Spain; 2.Univ Valencia, Dept Bioquim & Biol Mol, E-46100 Burjassot, Spain; 3.Univ Cent Marta Abreu Las Villas, Appl Chem Res Ctr, Santa Clara 54830, Villa Clara, Cuba; 4.Univ Cent Marta Abreu Las Villas, Fac Chem Pharm, Unit Comp Aided Mol Biosilico Discovery & Bioinfo, Santa Clara 54830, Villa Clara, Cuba; 5.Univ Valencia, Inst Univ Ciencia Mol, Edifici Inst Paterna, Valencia 46071, Spain |
推荐引用方式 GB/T 7714 | Castillo-Garit, Juan A.,Garcia-Domenech, Ramon,Marrero-Ponce, Yovani,et al. Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor[J],2011,68(555):334-340. |
APA | Castillo-Garit, Juan A.,Garcia-Domenech, Ramon,Marrero-Ponce, Yovani,Torrens, Francisco,&Abad, Concepcion.(2011).Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor.AFINIDAD,68(555),334-340. |
MLA | Castillo-Garit, Juan A.,et al."Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor".AFINIDAD 68.555(2011):334-340. |
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