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Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor
Castillo-Garit, Juan A.1,2,3,4; Garcia-Domenech, Ramon1; Marrero-Ponce, Yovani4; Torrens, Francisco5; Abad, Concepcion2
通讯作者Castillo-Garit, Juan A.
来源期刊AFINIDAD
ISSN0001-9704
出版年2011
卷号68期号:555页码:334-340
英文摘要

The non-stochastic and stochastic atom-based three dimensional (3D)-chiral quadratic indices are applied to predict the binding affinities of 26 stereoisomers of fenoterol with the beta(2)-adrenoceptor (beta(2)-AR). The prediction of beta(2)-AR binding affinities of the stereoisomers is carried out by multiple linear regression analysis. Two statistically significant QSAR models are obtained when non-stochastic (R-2 = 0.941 and s = 0.19) and stochastic (R-2 = 0.947 and s = 0.18) 3D-chiral quadratic indices are used. These models show adequate predictive power (assessed by the leave-one-out cross-validation experiment), yielding values of q(2) = 0.909 (s(cv) = 0.219) and q(2) = 0.917 (s(cv) = 0.208), respectively. These models compare favorably with a 3D-QSAR equation obtained with the CoMFA method (R-2 = 0.920, q(2) = 0.847 and s(cv) = 0.309). The results of our work demonstrate the usefulness of our topological approach for the prediction of biological activity, even in those studies in which the three-dimensional configuration of the chemicals play an important role in the bioactivity.


英文关键词non-stochastic and stochastic atom-based 3D-chiral quadratic indices beta(2)-adrenoceptor binding affinity fenoterol stereoisomer 3D-QSAR
类型Article
语种英语
国家Spain ; Cuba
收录类别SCI-E
WOS记录号WOS:000303079600002
WOS关键词CENTRAL CHIRALITY CODIFICATION ; MOLECULAR LINEAR INDEXES ; BETA(2)-ADRENERGIC RECEPTOR ; TOPOLOGICAL APPROACH ; DRUG DISCOVERY ; TOMOCOMD-CARDD ; OASIS METHOD ; DESIGN ; IDENTIFICATION
WOS类目Chemistry, Multidisciplinary
WOS研究方向Chemistry
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/166805
作者单位1.Univ Valencia, Fac Farm, Dept Quim Fis, Unidad Invest Diseno Farmacos & Conectividad Mol, E-46010 Valencia, Spain;
2.Univ Valencia, Dept Bioquim & Biol Mol, E-46100 Burjassot, Spain;
3.Univ Cent Marta Abreu Las Villas, Appl Chem Res Ctr, Santa Clara 54830, Villa Clara, Cuba;
4.Univ Cent Marta Abreu Las Villas, Fac Chem Pharm, Unit Comp Aided Mol Biosilico Discovery & Bioinfo, Santa Clara 54830, Villa Clara, Cuba;
5.Univ Valencia, Inst Univ Ciencia Mol, Edifici Inst Paterna, Valencia 46071, Spain
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GB/T 7714
Castillo-Garit, Juan A.,Garcia-Domenech, Ramon,Marrero-Ponce, Yovani,et al. Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor[J],2011,68(555):334-340.
APA Castillo-Garit, Juan A.,Garcia-Domenech, Ramon,Marrero-Ponce, Yovani,Torrens, Francisco,&Abad, Concepcion.(2011).Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor.AFINIDAD,68(555),334-340.
MLA Castillo-Garit, Juan A.,et al."Atom-based 3D-chiral quadratic indices. Part 3: prediction of the binding affinity of the stereoisomers of fenoterol to the beta(2) adrenergic receptor".AFINIDAD 68.555(2011):334-340.
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