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Plant C and N isotope values often correlate with rainfall on global and regional scales. This study examines the relationship between plant isotopic values and rainfall in the Eastern Mediterranean region. The results indicate significant correlations between both C and N isotope values and rainfall in C(3) plant communities. This significant relationship is maintained when plant communities are divided by plant life forms. Furthermore, a seasonal increase in C isotope values is observed during the dry season while N isotope values remain stable across the wet and dry seasons. Finally, the isotopic pattern in plants originating from desert environments differs from those from Mediterranean environments because some desert plants obtain most of their water from secondary sources, namely water channeled by local topographic features rather than direct rainfall. From these results it can be concluded that water availability is the primary factor controlling C and N isotope variability in plant communities in the Eastern Mediterranean.