Arid
DOI10.2225/vol13-issue6-fulltext-6
Development of trinucleotide (GGC)n SSR markers in peanut (Arachis hypogaea L.)
Yuan, Mei2; Gong, Limin1; Meng, Ronghua3; Li, Shuangling2; Dang, Phat4; Guo, Baozhu5; He, Guohao1
通讯作者He, Guohao
来源期刊ELECTRONIC JOURNAL OF BIOTECHNOLOGY
ISSN0717-3458
出版年2010
卷号13期号:6
英文摘要

Cultivated peanut (Arachis hypogaea L.) is an oilseed crop of economic importance. It is native to South America, and it is grown extensively in the semi-arid tropics of Asia, Africa, and Latin America. Given an extremely narrow genetic base, efforts are being made to develop simple sequence repeat (SSR) markers to provide useful genetic and genomic tools for the peanut research community. A SSR-enriched library to isolate trinucleotide (GGC)n SSRs in peanut was constructed. A total of 143 unique sequences containing (GGC)n repeats were identified. One hundred thirty eight primer pairs were successfully designed at the flanking regions of SSRs. A suitable polymerase was chosen to amplify these GC-rich sequences. Although a low level of polymorphism was observed in cultivated peanut by these new developed SSRs, a high level of transferability to wild species would be beneficial to increasing the number of SSRs in wild species.


英文关键词cultivated peanut microsatellites polymorphism simple sequence repeat
类型Article
语种英语
国家USA ; Peoples R China
收录类别SCI-E
WOS记录号WOS:000288177100006
WOS关键词SIMPLE SEQUENCE REPEATS ; RICH DNA-SEQUENCES ; GENETIC DIVERSITY ; PCR AMPLIFICATION ; MICROSATELLITE MARKERS ; MEDICAGO-TRUNCATULA ; LINKAGE MAP ; BETAINE ; GENOME ; FABACEAE
WOS类目Biotechnology & Applied Microbiology
WOS研究方向Biotechnology & Applied Microbiology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/163956
作者单位1.Tuskegee Univ, Coll Agr Environm & Nat Sci, Dept Agr Sci, Tuskegee, AL 36088 USA;
2.Shandong Peanut Res Inst, Qingdao, Peoples R China;
3.Univ Penn, Sch Med, Dept Pathol & Lab Med, Philadelphia, PA 19104 USA;
4.USDA ARS, Natl Peanut Res Lab, Dawson, GA 31742 USA;
5.USDA ARS, Crop Genet & Breeding Res Unit, Tifton, GA 31793 USA
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GB/T 7714
Yuan, Mei,Gong, Limin,Meng, Ronghua,et al. Development of trinucleotide (GGC)n SSR markers in peanut (Arachis hypogaea L.)[J],2010,13(6).
APA Yuan, Mei.,Gong, Limin.,Meng, Ronghua.,Li, Shuangling.,Dang, Phat.,...&He, Guohao.(2010).Development of trinucleotide (GGC)n SSR markers in peanut (Arachis hypogaea L.).ELECTRONIC JOURNAL OF BIOTECHNOLOGY,13(6).
MLA Yuan, Mei,et al."Development of trinucleotide (GGC)n SSR markers in peanut (Arachis hypogaea L.)".ELECTRONIC JOURNAL OF BIOTECHNOLOGY 13.6(2010).
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