Arid
Isolation and characterization of microsatellite repeats in Marama bean (Tylosema esculentum)
Takundwa, M.1; Chimwamurombe, P. M.1; Kunert, K.2; Cullis, C. A.3
通讯作者Chimwamurombe, P. M.
来源期刊AFRICAN JOURNAL OF AGRICULTURAL RESEARCH
ISSN1991-637X
出版年2010
卷号5期号:7页码:561-566
英文摘要

Marama bean [Tylosema esculentum (Burchell) Schreiber] occurs naturally in arid and dry parts of Southern Africa, including Botswana, Namibia and South Africa. Due to the high nutrient value of the seeds and tubers, rich in protein, oil and starch, it is a potential crop for arid areas where few conventional crops can survive. The objectives of this study were to design microsatellite primers based on microsatellite repeats identified in Marama bean and to determine their ability to detect polymorphisms for use in diversity characterization. DNA fragments of T. esculentum containing microsatellite loci were isolated by enrichment of genomic DNA by a modified FIASCO technique and sequenced. Nine Marama bean microsatellite libraries enriched for (AAG)(7), (GTT)(7), (AGG)(7), (GAG)(7), (CA)(10), (CT)(10), (TCC)(7), (CA)(15) and (CAC)(7) were created and thirty microsatellite primers based on the microsatellite regions of marama bean were designed and screened for polymorphism. Polymorphic microsatellites that were identified can be used as markers in future breeding programs. The screening for the polymorphic SSRs is being carried out to reach a target of 50 or more polymorphic SSR markers. It appears that the marama bean germplasm has abundant polymorphic microsatellites as 77% of the 30 loci screened initially were polymorphic.


英文关键词Marama bean microsatellite markers primers polymorphism maker assisted selection (MAS)
类型Article
语种英语
国家Namibia ; South Africa ; USA
收录类别SCI-E
WOS记录号WOS:000277858500013
WOS关键词GENETIC DIVERSITY ; MARKERS ; L. ; IDENTIFICATION ; UTILITY ; RICE ; SSRS
WOS类目Agriculture, Multidisciplinary
WOS研究方向Agriculture
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/162973
作者单位1.Univ Namibia, Dept Biol Sci, Windhoek, Namibia;
2.Univ Pretoria, Dept Plant Sci, ZA-0001 Pretoria, South Africa;
3.Case Western Reserve Univ, Dept Biol, Cleveland, OH 44106 USA
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Takundwa, M.,Chimwamurombe, P. M.,Kunert, K.,et al. Isolation and characterization of microsatellite repeats in Marama bean (Tylosema esculentum)[J],2010,5(7):561-566.
APA Takundwa, M.,Chimwamurombe, P. M.,Kunert, K.,&Cullis, C. A..(2010).Isolation and characterization of microsatellite repeats in Marama bean (Tylosema esculentum).AFRICAN JOURNAL OF AGRICULTURAL RESEARCH,5(7),561-566.
MLA Takundwa, M.,et al."Isolation and characterization of microsatellite repeats in Marama bean (Tylosema esculentum)".AFRICAN JOURNAL OF AGRICULTURAL RESEARCH 5.7(2010):561-566.
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