Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1111/j.1759-6831.2009.00053.x |
A fossil-calibrated relaxed clock for Ephedra indicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America | |
Ickert-Bond, Stefanie M.1,2; Rydin, Catarina3; Renner, Susanne S.4 | |
通讯作者 | Ickert-Bond, Stefanie M. |
来源期刊 | JOURNAL OF SYSTEMATICS AND EVOLUTION
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ISSN | 1674-4918 |
EISSN | 1759-6831 |
出版年 | 2009 |
卷号 | 47期号:5页码:444-456 |
英文摘要 | Ephedra comprises approximately 50 species, which are roughly equally distributed between the Old and New World deserts, but not in the intervening regions (amphitropical range). Great heterogeneity in the substitution rates of Gnetales (Ephedra, Gnetum, and Welwitschia) has made it difficult to infer the ages of the major divergence events in Ephedra, such as the timing of the Beringian disjunction in the genus and the entry into South America. Here, we use data from as many Gnetales species and genes as available from GenBank and from a recent study to investigate the timing of the major divergence events. Because of the tradeoff between the amount of missing data and taxon/gene sampling, we reduced the initial matrix of 265 accessions and 12 loci to 95 accessions and 10 loci, and further to 42 species (and 7736 aligned nucleotides) to achieve stationary distributions in the Bayesian molecular clock runs. Results from a relaxed clock with an uncorrelated rates model and fossil-based calibration reveal that New World species are monophyletic and diverged from their mostly Asian sister clade some 30 mya, fitting with many other Beringian disjunctions. The split between the single North American and the single South American clade occurred approximately 25 mya, well before the closure of the Panamanian Isthmus. Overall, the biogeographic history of Ephedra appears dominated by long-distance dispersal, but finer-scale studies are needed to test this hypothesis. |
英文关键词 | biogeography Ephedra relaxed molecular clock dating uncorrelated rates model |
类型 | Article |
语种 | 英语 |
国家 | USA ; Switzerland ; Germany |
收录类别 | SCI-E |
WOS记录号 | WOS:000270477800009 |
WOS关键词 | NUCLEAR RIBOSOMAL DNA ; SEED PLANT PHYLOGENY ; MOLECULAR CLOCK ; SEQUENCE DATA ; GYMNOSPERM GNETUM ; CHLOROPLAST DNA ; NORTH-AMERICA ; MISSING DATA ; LAND PLANTS ; GNETALES |
WOS类目 | Plant Sciences |
WOS研究方向 | Plant Sciences |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/161766 |
作者单位 | 1.Univ Alaska, UA Museum N Herbarium, Fairbanks, AK 99775 USA; 2.Univ Alaska, Inst Arctic Biol, Fairbanks, AK 99775 USA; 3.Univ Zurich, Inst Systemat Bot, CH-8008 Zurich, Switzerland; 4.Univ Munich Systemat Bot & Mycol, D-80638 Munich, Germany |
推荐引用方式 GB/T 7714 | Ickert-Bond, Stefanie M.,Rydin, Catarina,Renner, Susanne S.. A fossil-calibrated relaxed clock for Ephedra indicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America[J],2009,47(5):444-456. |
APA | Ickert-Bond, Stefanie M.,Rydin, Catarina,&Renner, Susanne S..(2009).A fossil-calibrated relaxed clock for Ephedra indicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America.JOURNAL OF SYSTEMATICS AND EVOLUTION,47(5),444-456. |
MLA | Ickert-Bond, Stefanie M.,et al."A fossil-calibrated relaxed clock for Ephedra indicates an Oligocene age for the divergence of Asian and New World clades and Miocene dispersal into South America".JOURNAL OF SYSTEMATICS AND EVOLUTION 47.5(2009):444-456. |
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