Arid
DOI10.1021/bi801772k
A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains
Hansen, Frederik T.1; Madsen, Claus K.1; Nordland, Anne Mette1; Grasser, Marion1; Merkle, Thomas2; Grasser, Klaus D.1
通讯作者Grasser, Klaus D.
来源期刊BIOCHEMISTRY
ISSN0006-2960
出版年2008
卷号47期号:50页码:13207-13214
英文摘要

The A/T-rich interaction domain (ARID) and the HMG-box domain represent DNA-interaction modules that are found in sequence-specific as well as nonsequence-specific DNA-binding proteins. Both domains are found in a variety of DNA-interacting proteins in a wide range of eukaryotic organisms. Proteins that contain both an ARID and an HMG-box domain, here termed ARID-HMG proteins, appear to be specific for plants. This protein family is conserved in higher plants (both mono- and dicot plants) as well as lower plants such as the moss Physcomitrella. Since ARID-HMG proteins have not been studied experimentally, we have examined here two family members from Arabidopsis. The genes encoding ARID-HMG1 and ARID-HMG2 are widely expressed in Arabidopsis but at different levels. Subcellular localization experiments studying ARID-HMG1 and ARID-HMG2 fused to GFP by fluorescence microscopy show that both proteins localize primarily to cell nuclei. Analyses of the DNA-binding properties using electrophoretic mobility shift assays revealed that mediated by the HMG-box domain, ARID-HMG I binds structure specifically to DNA minicircles. Mediated by the ARID, the protein binds preferentially to A/T-rich DNA, when compared with G/C-rich DNA. Therefore, both DNA-binding domains contribute to the DNA interactions of ARID-HMGI. Accordingly, the protein combines DNA-binding properties characteristic of ARID and HMG-box proteins.


类型Article
语种英语
国家Denmark ; Germany
收录类别SCI-E
WOS记录号WOS:000261510500009
WOS关键词MOBILITY GROUP PROTEINS ; DEAD RINGER ; ARABIDOPSIS-THALIANA ; ARID PROTEINS ; MAIZE ; GENE ; LOCALIZATION ; EXPRESSION ; REGIONS ; GENOME
WOS类目Biochemistry & Molecular Biology
WOS研究方向Biochemistry & Molecular Biology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/156650
作者单位1.Aalborg Univ, Dept Life Sci, DK-9000 Aalborg, Denmark;
2.Univ Bielefeld, Fac Biol, D-33594 Bielefeld, Germany
推荐引用方式
GB/T 7714
Hansen, Frederik T.,Madsen, Claus K.,Nordland, Anne Mette,et al. A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains[J],2008,47(50):13207-13214.
APA Hansen, Frederik T.,Madsen, Claus K.,Nordland, Anne Mette,Grasser, Marion,Merkle, Thomas,&Grasser, Klaus D..(2008).A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains.BIOCHEMISTRY,47(50),13207-13214.
MLA Hansen, Frederik T.,et al."A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains".BIOCHEMISTRY 47.50(2008):13207-13214.
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