Arid
DOI10.1139/W06-139
Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer
Gtari, Maher; Daffonchio, Daniele; Boudabous, Abdellatif
通讯作者Gtari, Maher
来源期刊CANADIAN JOURNAL OF MICROBIOLOGY
ISSN0008-4166
出版年2007
卷号53期号:3页码:440-445
英文摘要

Diversity of Frankia microsymbionts of non-native Elaeagnus angustifolia L. plants spontaneously growing in a Tunisian desertic retreat area, the date-palm oasis of Tozeur, was investigated by polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) and PCR-sequencing techniques targeting the nifD-K intergenic spacer. Three PCR-RFLP haplotypes (I, II, and III) were detected among collected nodules. Haplotype I was detected at all five sampling sites and dominated the other haplotypes present at these sites. This haplotype was also exhibited by strain BMG5.10, which was isolated by a plant-capturing assay in 1998 from soil collected in the same locality, qualifying it to be the most competitive haplotype in the edapho-climatic condition of the studied desertic date-palm oasis. nifD-K sequences of the three haplotypes formed a closely related phylogenetic subgroup. These results suggest that Frankia variability is constrained by severe edapho-climatic conditions of retreated desert in Tunisian area.


英文关键词Frankia IGS nifD-K Elaeagnus date-palm oasis Tunisia
类型Article
语种英语
国家Tunisia ; Italy
收录类别SCI-E
WOS记录号WOS:000247426500014
WOS关键词INFECTIVE FRANKIA ; NODULAR MICROSYMBIONTS ; FAMILY CASUARINACEAE ; COMPATIBLE FRANKIA ; ALNUS-GLUTINOSA ; ROOT-NODULES ; STRAINS ; SOIL ; POLYMORPHISM ; BACTERIA
WOS类目Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Immunology ; Microbiology
WOS研究方向Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Immunology ; Microbiology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/153741
作者单位(1)Fac Sci Tunis, Dept Biol, Lab Microorganbismes & Biomol Act, Tunis 2092, Tunisia;(2)Univ Studi, Dept Sci & Tecnol Alimentari & Microbiol, I-20133 Milan, Italy
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GB/T 7714
Gtari, Maher,Daffonchio, Daniele,Boudabous, Abdellatif. Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer[J],2007,53(3):440-445.
APA Gtari, Maher,Daffonchio, Daniele,&Boudabous, Abdellatif.(2007).Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer.CANADIAN JOURNAL OF MICROBIOLOGY,53(3),440-445.
MLA Gtari, Maher,et al."Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer".CANADIAN JOURNAL OF MICROBIOLOGY 53.3(2007):440-445.
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