Knowledge Resource Center for Ecological Environment in Arid Area
DOI | 10.1139/W06-139 |
Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer | |
Gtari, Maher; Daffonchio, Daniele; Boudabous, Abdellatif | |
通讯作者 | Gtari, Maher |
来源期刊 | CANADIAN JOURNAL OF MICROBIOLOGY
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ISSN | 0008-4166 |
出版年 | 2007 |
卷号 | 53期号:3页码:440-445 |
英文摘要 | Diversity of Frankia microsymbionts of non-native Elaeagnus angustifolia L. plants spontaneously growing in a Tunisian desertic retreat area, the date-palm oasis of Tozeur, was investigated by polymerase chain reaction - restriction fragment length polymorphism (PCR-RFLP) and PCR-sequencing techniques targeting the nifD-K intergenic spacer. Three PCR-RFLP haplotypes (I, II, and III) were detected among collected nodules. Haplotype I was detected at all five sampling sites and dominated the other haplotypes present at these sites. This haplotype was also exhibited by strain BMG5.10, which was isolated by a plant-capturing assay in 1998 from soil collected in the same locality, qualifying it to be the most competitive haplotype in the edapho-climatic condition of the studied desertic date-palm oasis. nifD-K sequences of the three haplotypes formed a closely related phylogenetic subgroup. These results suggest that Frankia variability is constrained by severe edapho-climatic conditions of retreated desert in Tunisian area. |
英文关键词 | Frankia IGS nifD-K Elaeagnus date-palm oasis Tunisia |
类型 | Article |
语种 | 英语 |
国家 | Tunisia ; Italy |
收录类别 | SCI-E |
WOS记录号 | WOS:000247426500014 |
WOS关键词 | INFECTIVE FRANKIA ; NODULAR MICROSYMBIONTS ; FAMILY CASUARINACEAE ; COMPATIBLE FRANKIA ; ALNUS-GLUTINOSA ; ROOT-NODULES ; STRAINS ; SOIL ; POLYMORPHISM ; BACTERIA |
WOS类目 | Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Immunology ; Microbiology |
WOS研究方向 | Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Immunology ; Microbiology |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/153741 |
作者单位 | (1)Fac Sci Tunis, Dept Biol, Lab Microorganbismes & Biomol Act, Tunis 2092, Tunisia;(2)Univ Studi, Dept Sci & Tecnol Alimentari & Microbiol, I-20133 Milan, Italy |
推荐引用方式 GB/T 7714 | Gtari, Maher,Daffonchio, Daniele,Boudabous, Abdellatif. Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer[J],2007,53(3):440-445. |
APA | Gtari, Maher,Daffonchio, Daniele,&Boudabous, Abdellatif.(2007).Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer.CANADIAN JOURNAL OF MICROBIOLOGY,53(3),440-445. |
MLA | Gtari, Maher,et al."Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer".CANADIAN JOURNAL OF MICROBIOLOGY 53.3(2007):440-445. |
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