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We measured soil profile concentrations and emission Of CO2, CH4 and N2O from soils along a lakeshore in Garwood Valley, Antarctica, to assess the extent and biogeochemical significance of biogenic gas emission to C and N cycling processes. Simultaneous emission of all three gases from the same site indicated that aerobic and anaerobic processes occurred in different layers or different parts of each soil profile. The day and location of high gas concentrations in the soil profile corresponded to those having high gas emission, but the pattern of concentration with depth in the soil profile was not consistent across sites. That the highest gas concentrations were not always in the deepest soil layer suggests either limited production or gas diffusion in the deeper layers. Emission of CO2 was as high as 47 mu mol m(-2) min(-1) and was strongly related to soil temperature. Soil respiration differed significantly according to location on the lakeshore, suggesting that factors other than environmental variables, such as the amount and availability of O-2 and nutrients, play an important role in C mineralization processes in these soils. High surface emission (maximum: 15 mu mol m(-2) min(-1)) and profile gas concentration (maximum: 5780 mu L L-1) of CH4 were at levels comparable to those in resource-rich temperate ecosystems, indicating an active indigenous population of methanogenic organisms. Emission of NO was low and highly variable, but the presence of this gas and NO3 in some of the soils suggest that denitrification and nitrification occur there. No significant relationships between N2O emission and environmental variables were found. It appears that considerable C and N turnover occurs in the lakeshore soils, and accurate accounting will require measurements of aerobic and anaerobic mineralization. The production and emission of biogenic gases confirm the importance of these soils as hotspots of biological activity in the dry valleys and probable reservoirs of biological diversity. Crown Copyright (c) 2006 Published by Elsevier Ltd. All rights reserved.