Arid
Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica
Shivaji, S; Reddy, GSN; Aduri, RP; Kutty, R; Ravenschlag, K
通讯作者Shivaji, S
来源期刊CELLULAR AND MOLECULAR BIOLOGY
ISSN0145-5680
出版年2004
卷号50期号:5页码:525-536
英文摘要

The bacterial diversity of a soil sample collected in the vicinity of Lake Zub, Schirmacher Oasis, Antarctica, was determined both by establishing pure colonies of culturable bacteria and by cloning the total 16S rDNA of the soil and establishing the phylogeny of the clones. Analysis of the 16S rRNA gene clones indicated that the bacteria belonged to the classes alpha-proteobacteria, beta-proteobacteria, gamma-proteobacteria, Gemmatimonas, Bacteriodetes, Actinobacteria, Chloroflexi and Chlamydiae. In addition, seven clones were categorized as unidentified and unculturable in the classes of beta-Proteobacteria, Actinobacteria, Chloroflexi and Chlamydiae. Further, the culturable bacteria from the same site were identified as belonging to the genera. Pseudomonas, Sphingobacterium, Arthrobacter, Micrococcus, Brevondimonas, Rhodococcus and Microbacterium. These results identify for the first time the presence of bacteria belonging to the genera Brevundimonas, Microbacterium, Rhodococcus, Serratia, Enterobacter, Rhodopseudomonas, Sphingomonas, Acidovorax, Burkholderia, Nevskia, Gemmatimonas, Xanthomonas and Flexibacter in Antarctica. Further, comparison of the Antarctic soil bacterial diversity with other cold habitats of Antarctica like from sediments, ice and cyanobacterial mat samples indicated that the bacterial diversity in soil was similar to the diversity observed in the continental shelf sediment sample. The Antarctic soil clones also resembled the bacterial diversity of soils from other geographical regions, but were unique in that none of the clones from the soil belonged to the uncultured Y, O, G, A and B groups (24) common to all soil samples.


英文关键词16S rRNA gene clones diversity Antarctica psychrophiles
类型Article
语种英语
国家India ; Germany
收录类别SCI-E
WOS记录号WOS:000225037100004
WOS关键词16S RIBOSOMAL-RNA ; CYANOBACTERIAL MAT SAMPLE ; MCMURDO DRY VALLEYS ; SP-NOV. ; PSYCHROPHILIC BACTERIUM ; MICROBIAL DIVERSITY ; COMMUNITY STRUCTURE ; GENE CLONING ; RAPID METHOD ; LAKE VOSTOK
WOS类目Biochemistry & Molecular Biology ; Cell Biology
WOS研究方向Biochemistry & Molecular Biology ; Cell Biology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/146448
作者单位(1)Ctr Cellular & Mol Biol, Hyderabad 500007, Andhra Pradesh, India;(2)Max Planck Inst Marine Microbiol, D-28359 Bremen, Germany
推荐引用方式
GB/T 7714
Shivaji, S,Reddy, GSN,Aduri, RP,et al. Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica[J],2004,50(5):525-536.
APA Shivaji, S,Reddy, GSN,Aduri, RP,Kutty, R,&Ravenschlag, K.(2004).Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica.CELLULAR AND MOLECULAR BIOLOGY,50(5),525-536.
MLA Shivaji, S,et al."Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica".CELLULAR AND MOLECULAR BIOLOGY 50.5(2004):525-536.
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