Knowledge Resource Center for Ecological Environment in Arid Area
Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica | |
Shivaji, S; Reddy, GSN; Aduri, RP; Kutty, R; Ravenschlag, K | |
通讯作者 | Shivaji, S |
来源期刊 | CELLULAR AND MOLECULAR BIOLOGY
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ISSN | 0145-5680 |
出版年 | 2004 |
卷号 | 50期号:5页码:525-536 |
英文摘要 | The bacterial diversity of a soil sample collected in the vicinity of Lake Zub, Schirmacher Oasis, Antarctica, was determined both by establishing pure colonies of culturable bacteria and by cloning the total 16S rDNA of the soil and establishing the phylogeny of the clones. Analysis of the 16S rRNA gene clones indicated that the bacteria belonged to the classes alpha-proteobacteria, beta-proteobacteria, gamma-proteobacteria, Gemmatimonas, Bacteriodetes, Actinobacteria, Chloroflexi and Chlamydiae. In addition, seven clones were categorized as unidentified and unculturable in the classes of beta-Proteobacteria, Actinobacteria, Chloroflexi and Chlamydiae. Further, the culturable bacteria from the same site were identified as belonging to the genera. Pseudomonas, Sphingobacterium, Arthrobacter, Micrococcus, Brevondimonas, Rhodococcus and Microbacterium. These results identify for the first time the presence of bacteria belonging to the genera Brevundimonas, Microbacterium, Rhodococcus, Serratia, Enterobacter, Rhodopseudomonas, Sphingomonas, Acidovorax, Burkholderia, Nevskia, Gemmatimonas, Xanthomonas and Flexibacter in Antarctica. Further, comparison of the Antarctic soil bacterial diversity with other cold habitats of Antarctica like from sediments, ice and cyanobacterial mat samples indicated that the bacterial diversity in soil was similar to the diversity observed in the continental shelf sediment sample. The Antarctic soil clones also resembled the bacterial diversity of soils from other geographical regions, but were unique in that none of the clones from the soil belonged to the uncultured Y, O, G, A and B groups (24) common to all soil samples. |
英文关键词 | 16S rRNA gene clones diversity Antarctica psychrophiles |
类型 | Article |
语种 | 英语 |
国家 | India ; Germany |
收录类别 | SCI-E |
WOS记录号 | WOS:000225037100004 |
WOS关键词 | 16S RIBOSOMAL-RNA ; CYANOBACTERIAL MAT SAMPLE ; MCMURDO DRY VALLEYS ; SP-NOV. ; PSYCHROPHILIC BACTERIUM ; MICROBIAL DIVERSITY ; COMMUNITY STRUCTURE ; GENE CLONING ; RAPID METHOD ; LAKE VOSTOK |
WOS类目 | Biochemistry & Molecular Biology ; Cell Biology |
WOS研究方向 | Biochemistry & Molecular Biology ; Cell Biology |
资源类型 | 期刊论文 |
条目标识符 | http://119.78.100.177/qdio/handle/2XILL650/146448 |
作者单位 | (1)Ctr Cellular & Mol Biol, Hyderabad 500007, Andhra Pradesh, India;(2)Max Planck Inst Marine Microbiol, D-28359 Bremen, Germany |
推荐引用方式 GB/T 7714 | Shivaji, S,Reddy, GSN,Aduri, RP,et al. Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica[J],2004,50(5):525-536. |
APA | Shivaji, S,Reddy, GSN,Aduri, RP,Kutty, R,&Ravenschlag, K.(2004).Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica.CELLULAR AND MOLECULAR BIOLOGY,50(5),525-536. |
MLA | Shivaji, S,et al."Bacterial diversity of a soil sample from Schirmacher Oasis, Antarctica".CELLULAR AND MOLECULAR BIOLOGY 50.5(2004):525-536. |
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