Arid
DOI10.1016/S0149-7634(01)00022-7
SEE: a tool for the visualization and analysis of rodent exploratory behavior
Drai, D; Golani, I
通讯作者Golani, I
来源期刊NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS
ISSN0149-7634
EISSN1873-7528
出版年2001
卷号25期号:5页码:409-426
英文摘要

The complexity of exploratory behavior creates a need for a visualization and analysis tool that will highlight regularities and help generating new hypotheses about the structure of this behavior. The hypotheses can then be formulated as algorithms that capture the patterns and quantify them. SEE is a Mathematica based software developed by us for the exploration of exploratory behavior. The raw data for SEE are a time series of the animal ’s coordinates in space sampled at a rate that allows a meaningful computation of speeds. SEE permits: (i) a visualization of the path of the animal and a computation of the dynamics of activity; (ii) a decomposition of the path into several modes of motion (1st gear, 2nd gear, etc.) and a computation of the typical maximal speeds, the spatial spread, and the proportion of each of these modes; and(iii) a visualization of the location in the environment of stopping episodes, along with their dwell time. These visualizations highlight the presence of preferred places, including the animal’s so-called home base, and permits a computation of the spatio-temporal diversity in the location of stopping episodes. The software also: (i) decomposes the animal’s path into round trips from the home base, called ’excursions’, and computes the number of stops per excursion; (ii) generates a visualization of the phase space (path + speed, traced in a three-dimensional graph) of any progression segment or list of such segments; and (iii) produces a visualization of the way places in the animal’s operational world are connected to each other. SEE also permits the definition and computation of behavioral endpoints across any section of any database of raw data. The range of applicability of SEE to various experimental setups, tracking procedures, species, and preparations is addressed in the discussion. (C) 2001 Published by Elsevier Science Ltd.


英文关键词phenotyping mouse behavior locomotor behavior computerized tracking spatial memory open field measuring behavior cognitive map behavior genetics high throughput phenotyping place fields
类型Review
语种英语
国家Israel
收录类别SCI-E
WOS记录号WOS:000171514900003
WOS关键词RATS RATTUS-NORVEGICUS ; LONG-TERM EXPLORATION ; ELEVATED PLUS-MAZE ; HOME BASE BEHAVIOR ; PATH-INTEGRATION ; MOBILITY GRADIENT ; SYSTEMATIC SEARCH ; GENETIC-ANALYSIS ; LOW RESPONDERS ; DESERT ANTS
WOS类目Behavioral Sciences ; Neurosciences
WOS研究方向Behavioral Sciences ; Neurosciences & Neurology
资源类型期刊论文
条目标识符http://119.78.100.177/qdio/handle/2XILL650/141513
作者单位(1)Tel Aviv Univ, George S Wise Fac Life Sci, Dept Zool, IL-69978 Tel Aviv, Israel
推荐引用方式
GB/T 7714
Drai, D,Golani, I. SEE: a tool for the visualization and analysis of rodent exploratory behavior[J],2001,25(5):409-426.
APA Drai, D,&Golani, I.(2001).SEE: a tool for the visualization and analysis of rodent exploratory behavior.NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS,25(5),409-426.
MLA Drai, D,et al."SEE: a tool for the visualization and analysis of rodent exploratory behavior".NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS 25.5(2001):409-426.
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