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The disposal of hazardous and radioactive waste in arid regions requires a thorough understanding of the occurrence of soil-water flux and recharge. Soil-water chemistry and isotopic data are presented from three deep vadose zone boreholes (>230 m) at the Nevada Test Site, located in the Great Basin geographic province of the southwestern United States, to quantify soil-water flux and its relation to climate. The low water contents found in the soils significantly reduce the mixing of tracers in the subsurface and provide a unique opportunity to examine the role of climate variation on recharge in arid climate. Tracing techniques and core data are examined in this work to reconstruct the paleohydrologic conditions existing in the vadose zone well beyond the timescales typically investigated, Stable chloride and chlorine 36 profiles indicate that the soil waters deep in the vadose zone range in age from approximately 20,000 to 120,000 years. Secondary chloride bulges that are present in two of the three profiles support the concept of recharge occurring at or near the last two glacial maxima, when the climate of the area was considerably wetter and cooler. The stable isotopic composition of the soil water in the profiles is significantly more depleted in heavy isotopes than is modern precipitation, suggesting that recharge under the current climate is not occurring at this arid site. Past and present recharge appears to have been strongly controlled by surface topography, with increased incidence of recharge where runoff from the surrounding mountains may have been concentrated. The data obtained from this detailed drilling and sampling program shed new light on the behavior of water in thick vadose zones and, in particular, show the sensitivity of arid regions to the extreme variations in climate experienced by the region over the last two glacial maxima.