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The clustering of CpG islands may constitute an important determinant of the 3D organization of interphase chromosomes 期刊论文
发表期刊: EPIGENETICS. 出版年: 2014, 卷号: 9, 期号: 7, 页码: 951-963
作者:  Gushchanskaya, Ekaterina S.;  Artemov, Artem V.;  Ulyanov, Sergey V.;  Logacheva, Maria D.;  Penin, Aleksey A.;  Kotova, Elena S.;  Akopov, Sergey B.;  Nikolaev, Lev G.;  Iarovaia, Olga V.;  Sverdlov, Eugene D.;  Gavrilov, Alexey A.;  Razin, Sergey V.
收藏  |  浏览/下载：32/0  |  提交时间：2019/11/29
CpG island  housekeeping gene  CTCF  genome spatial organization  4C  
OASIS/CREB3L1 is epigenetically silenced in human bladder cancer facilitating tumor cell spreading and migration in vitro 期刊论文
发表期刊: EPIGENETICS. 出版年: 2014, 卷号: 9, 期号: 12, 页码: 1626-1640
作者:  Rose, Michael;  Schubert, Claudia;  Dierichs, Laura;  Gaisa, Nadine T.;  Heer, Matthias;  Heidenreich, Axel;  Knuechel, Ruth;  Dahl, Edgar
收藏  |  浏览/下载：20/0  |  提交时间：2019/11/29
bladder cancer  HTRA3  OASIS  CREB3L1  promoter methylation  tumor cell migration  tumor suppressor gene  ATCC  American Type Culture Collection  BMP-2  bone morphogenetic protein 2  CA  California  cDNA  copy number desoxyribonucleic acid  CIS  Carcinoma in situ  CREB3L1  element binding protein 3-like 1  DAB  3-3 diaminobenzidine  DAC  5-aza-2-deoxycytidine  DNA  desoxyribonucleic acid  EK  ethics committee  ER  endoplasmic reticulum  FC  fold change  FFPE  formalin fixed paraffin embedded  G1  well differentiated  G2  moderately differentiated  G3  poorly differentiated  GAPDH  glyceraldehyde 3-phosphate dehydrogenase  HCV  Hepatitis C virus  HPV  human papilloma virus  HTRA (1-4)  high-temperature requirement factor A (1-4)  IQR  interquartile range  IRS  immunoreactive score  LMU  Ludwig-Maximilians-University  M  methylated  MIBC  muscle invasive bladder cancer  mRNA  messenger ribo nucleic acid  MSP  methylation specific PCR  n  number  NMIBC  non-muscle invasive bladder cancer  ns  not significant  NU  normal urothelium  OASIS  old astrocyte specifically-induced substance  PCR  polymerase chain reaction  pTa  papillary non-invasive tumors  RIP  regulated intramembrane proteolysis  RWTH  Rheinisch Westfalisch Technische Hochschule  s  e  m  standard error of the margin  SP1  site 1 protease  SP2  site 2 protease  TCGA  The Cancer Genome Atlas  TGF-  transforming growth factor beta  TSA  trichostatin A  TSS  transcription start site  U  unmethylated  UC  urothelial cell cancer  UPR  unfold protein response  USA  United States of America  WHO  World Health Organization  WI  Wisconsin  
Large replication skew domains delimit GC-poor gene deserts in human 期刊论文
发表期刊: COMPUTATIONAL BIOLOGY AND CHEMISTRY. 出版年: 2014, 卷号: 53, 页码: 153-165
作者:  Zaghloul, Lamia;  Drillon, Guenola;  Boulos, Rasha E.;  Argoul, Francoise;  Thermes, Claude;  Arneodo, Alain;  Audit, Benjamin
收藏  |  浏览/下载：14/0  |  提交时间：2019/11/29
Nucleotide composition strand asymmetry  Skew-N domains  Skew-split-N domains  Master replication origins  Gene organization  Human genome  
Analysis of the mitochondrial genome of Schistocerca gregaria gregaria (Orthoptera: Acrididae) 期刊论文
发表期刊: BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY. 出版年: 2010, 卷号: 99, 期号: 2, 页码: 296-305
作者:  Erler, Silvio;  Ferenz, Hans-Joerg;  Moritz, Robin F. A.;  Kaatz, Hans-Hinrich
收藏  |  浏览/下载：7/0  |  提交时间：2019/11/29
gene organization  phylogeny  Schistocerca americana  subspecies  
Mitochondrial DNA sequences of the Afro-Arabian spiny-tailed lizards (genus Uromastyx; family Agamidae): phylogenetic analyses and evolution of gene arrangements 期刊论文
发表期刊: BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY. 出版年: 2005, 卷号: 85, 期号: 2, 页码: 247-260
作者:  Amer, SAM;  Kumazawa, Y
收藏  |  浏览/下载：7/0  |  提交时间：2019/11/28
desert lizards  gene organization  molecular clock  phylogeny  tRNA